RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 PLIN4Q96Q06 1357 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 TIMP1P01033 207 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 ZFYP08048 801 aaPredicted RBP24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 GNAT2P19087 354 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 CNTN2Q02246 1040 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 GRIN2CQ14957 1233 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 SLFN13Q68D06 897 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 CCDC144CPQ8IYA2 1237 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 IFNL3Q8IZI9 196 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 GMCL1P1Q8NEA9 526 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 VTI1AQ96AJ9 217 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 ABHD16BQ9H3Z7 469 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 FBXO40Q9UH90 709 aa24.84■■□□□ 1.57
VIM-AS1-202ENST00000605833 TMEM265A0A087WTH1 108 aa24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 TSPY3P0CV98 308 aa24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 TSPY8P0CW00 308 aa24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 BMP3P12645 472 aa24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 CHST13Q8NET6 341 aa24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 UPF3AQ9H1J1 476 aaKnown RBP24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 DCTPP1Q9H773 170 aa24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 ZNF287Q9HBT7 754 aa24.83■■□□□ 1.57
VIM-AS1-202ENST00000605833 TMEM232C9JQI7 657 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 GJA9P57773 515 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 MFSD5Q6N075 450 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 PCSK9Q8NBP7 692 aaKnown RBP24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 PPP1R12CQ9BZL4 782 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 KATNBL1Q9H079 304 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 SPC25Q9HBM1 224 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 ELP1O95163 1332 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 MROH7Q68CQ1 1323 aa24.82■■□□□ 1.56
VIM-AS1-202ENST00000605833 LCTP09848 1927 aa24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 A0A0U1RQG5 324 aaPredicted RBP24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 PATL2C9JE40 543 aaKnown RBP24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 CDK7P50613 346 aa24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 OAZ1P54368 228 aa24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 BEX3Q00994 111 aa24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 GNASQ5JWF2 1037 aa24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 USP38Q8NB14 1042 aa24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 NEDD1Q8NHV4 660 aa24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 DDX49Q9Y6V7 483 aaKnown RBP24.81■■□□□ 1.56
VIM-AS1-202ENST00000605833 CTAGE5O15320 804 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 CSF2RAP15509 400 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 PTGS1P23219 599 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 STAT2P52630 851 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 TFAP4Q01664 338 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 IKQ13123 557 aaPredicted RBP24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 C16orf59Q7L2K0 433 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 RASGRP2Q7LDG7 609 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 AGBL1Q96MI9 1066 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 ACAD9Q9H845 621 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 RNF146Q9NTX7 359 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 SYNPO2Q9UMS6 1093 aa24.8■■□□□ 1.56
VIM-AS1-202ENST00000605833 GBF1Q92538 1859 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 GRXCR1A8MXD5 290 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 ARVCFO00192 962 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 ACRP10323 421 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 SNAP25P60880 206 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 PDE4BQ07343 736 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 PPARAQ07869 468 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 TMEM240Q5SV17 173 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 FAM126BQ8IXS8 530 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 FAM133AQ8N9E0 248 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 OTUD7AQ8TE49 926 aaPredicted RBP24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 TIFAQ96CG3 184 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 NAPBQ9H115 298 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 A1CFQ9NQ94 594 aaKnown RBP24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 ASTN1O14525 1302 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 ZNF536O15090 1300 aa24.79■■□□□ 1.56
VIM-AS1-202ENST00000605833 PBX2P40425 430 aa24.78■■□□□ 1.56
VIM-AS1-202ENST00000605833 PPIGQ13427 754 aaKnown RBP eCLIP24.78■■□□□ 1.56
VIM-AS1-202ENST00000605833 NOL8Q76FK4 1167 aaKnown RBP24.78■■□□□ 1.56
VIM-AS1-202ENST00000605833 FSD1Q9BTV5 496 aa24.78■■□□□ 1.56
VIM-AS1-202ENST00000605833 NACAP1Q9BZK3 213 aa24.78■■□□□ 1.56
VIM-AS1-202ENST00000605833 ZNF576Q9H609 170 aa24.78■■□□□ 1.56
VIM-AS1-202ENST00000605833 CHD9Q3L8U1 2897 aa24.78■■□□□ 1.56
VIM-AS1-202ENST00000605833 SOWAHBA6NEL2 793 aa24.77■■□□□ 1.56
VIM-AS1-202ENST00000605833 MCCP23508 829 aa24.77■■□□□ 1.56
VIM-AS1-202ENST00000605833 SLC1A4P43007 532 aa24.77■■□□□ 1.56
VIM-AS1-202ENST00000605833 CCDC174Q6PII3 467 aa24.77■■□□□ 1.56
VIM-AS1-202ENST00000605833 KCTD1Q719H9 257 aa24.77■■□□□ 1.56
VIM-AS1-202ENST00000605833 PI4K2BQ8TCG2 481 aa24.77■■□□□ 1.56
VIM-AS1-202ENST00000605833 TLR3O15455 904 aaKnown RBP24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 ALAS1P13196 640 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 TNFAIP2Q03169 654 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 CXCL17Q6UXB2 119 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 CCDC129Q6ZRS4 1044 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 GMCL1Q96IK5 515 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 PBX4Q9BYU1 374 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 INCENPQ9NQS7 918 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 STX8Q9UNK0 236 aa24.76■■□□□ 1.55
VIM-AS1-202ENST00000605833 TTC28Q96AY4 2481 aa24.75■■□□□ 1.55
VIM-AS1-202ENST00000605833 NMT2O60551 498 aa24.75■■□□□ 1.55
VIM-AS1-202ENST00000605833 SLC3A2P08195 630 aaKnown RBP24.75■■□□□ 1.55
VIM-AS1-202ENST00000605833 CYP2C18P33260 490 aa24.75■■□□□ 1.55
VIM-AS1-202ENST00000605833 LRRFIP1Q32MZ4 808 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms