RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZP2Q05996 745 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 TRDNQ13061 729 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 PKP1Q13835 747 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC93Q567U6 631 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 TTC22Q5TAA0 569 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 ANKRD45Q5TZF3 282 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 MAP1SQ66K74 1059 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC91Q7Z6B0 441 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 USP48Q86UV5 1035 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 PLA2G4DQ86XP0 818 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 WFDC3Q8IUB2 231 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 SULF2Q8IWU5 870 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZSCAN18Q8TBC5 510 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 TMX3Q96JJ7 454 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 UTP14AQ9BVJ6 771 aaKnown RBP4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 EMILIN2Q9BXX0 1053 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 CHMP4AQ9BY43 222 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 LNPKQ9C0E8 428 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 NIF3L1Q9GZT8 377 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 PRDM7Q9NQW5 492 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 SLC52A1Q9NWF4 448 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZNF446Q9NWS9 450 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 POLKQ9UBT6 870 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 JRKLQ9Y4A0 524 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 ATP6V1DQ9Y5K8 247 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 PPIP5K1Q6PFW1 1433 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 UNC13BO14795 1591 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 RPAP1Q9BWH6 1393 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 DUOX2Q9NRD8 1548 aa4.77□□□□□ -1.65
HMGB1P50-201ENST00000605814 ERCC6Q03468 1493 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 FANCD2Q9BXW9 1451 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 LOC102724159A0A0B4J2E5 919 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC196A0A1B0GTZ2 297 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CARNS1A5YM72 827 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 AP5Z1O43299 807 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CEP152O94986 1710 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 TSPY4P0CV99 314 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 TSPY10P0CW01 314 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CCDC192P0DO97 292 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 ATP2B1P20020 1258 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 SATB1Q01826 763 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 FAAP100Q0VG06 881 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 GRM2Q14416 872 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 PWP2Q15269 919 aaKnown RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CDC42BPAQ5VT25 1732 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZSCAN25Q6NSZ9 544 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 TTC37Q6PGP7 1564 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 FBXO38Q6PIJ6 1188 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 SARM1Q6SZW1 724 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CASC1Q6TDU7 716 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 RBM43Q6ZSC3 357 aaKnown RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CDC37L1Q7L3B6 337 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 FILIP1Q7Z7B0 1213 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 SRLQ86TD4 932 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 C17orf53Q8N3J3 647 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZGPATQ8N5A5 531 aaKnown RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 TMEM57Q8N5G2 664 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 FLAD1Q8NFF5 587 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 TDRD7Q8NHU6 1098 aaKnown RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 SSH1Q8WYL5 1049 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 ISL2Q96A47 359 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 CITED4Q96RK1 184 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 SRRTQ9BXP5 876 aaKnown RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 RBM28Q9NW13 759 aaKnown RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 RAI14Q9P0K7 980 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 NOB1Q9ULX3 412 aaKnown RBP4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 AKAP2Q9Y2D5 859 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 SNX11Q9Y5W9 270 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 PLEKHG2Q9H7P9 1386 aa4.76□□□□□ -1.65
HMGB1P50-201ENST00000605814 IQGAP3Q86VI3 1631 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 RAPGEF6Q8TEU7 1601 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 NUP153P49790 1475 aaKnown RBP4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZNF518AQ6AHZ1 1483 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 IFT140Q96RY7 1462 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 MAST1Q9Y2H9 1570 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 ERC2O15083 957 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 PNMA6AP0CW24 399 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 MCCP23508 829 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 AFMP43652 599 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 TUBB4BP68371 445 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 PTPN14Q15678 1187 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZSCAN26Q16670 478 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 PHLDB3Q6NSJ2 640 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 SPOCD1Q6ZMY3 1216 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 ITPRIPQ8IWB1 547 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 STAG1Q8WVM7 1258 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 CFAP53Q96M91 514 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 DMRTB1Q96MA1 342 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 FAM129BQ96TA1 746 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 DEF6Q9H4E7 631 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 A1CFQ9NQ94 594 aaKnown RBP4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 ARGLU1Q9NWB6 273 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 ZNF215Q9UL58 517 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 SAMM50Q9Y512 469 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 MADDQ8WXG6 1647 aa4.75□□□□□ -1.65
HMGB1P50-201ENST00000605814 PTCH1Q13635 1447 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 SSH2Q76I76 1423 aa4.74□□□□□ -1.65
HMGB1P50-201ENST00000605814 TRAPPC8Q9Y2L5 1435 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 260.5 ms