RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 A0A0U1RQJ8 604 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 FAM237AA0A1B0GTK4 181 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 SOCS7O14512 581 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 CHUKO15111 745 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 PRC1O43663 620 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 LILRA1O75019 489 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 TFRCP02786 760 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 CASP14P31944 242 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 TFCP2Q12800 502 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 SF3B2Q13435 895 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 TRIM14Q14142 442 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 IMMTQ16891 758 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 LRCH2Q5VUJ6 765 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 KANK3Q6NY19 840 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 ELOA2Q8IYF1 753 aaPredicted RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 ATRIPQ8WXE1 791 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 N4BP2L2Q92802 583 aaPredicted RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 GDAP1L1Q96MZ0 367 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 INSM2Q96T92 566 aaPredicted RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 NUP88Q99567 741 aaPredicted RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 RABEP2Q9H5N1 569 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 SAMSN1Q9NSI8 373 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 UTYO14607 1347 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 CEMIPQ8WUJ3 1361 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 AFDNP55196 1824 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 TTLL8A6PVC2 850 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 TMCO5BA8MYB1 307 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 GOLIM4O00461 696 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 CHGBP05060 677 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 HSPD1P10809 573 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 GPTP24298 496 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 ERCC5P28715 1186 aaPredicted RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 ELF1P32519 619 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 DDR1Q08345 913 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 AIMP1Q12904 312 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 IRF5Q13568 498 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 ZNF827Q17R98 1081 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 LCE2CQ5TA81 110 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 RAB11FIP4Q86YS3 637 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 FBXL16Q8N461 479 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 CEP120Q8N960 986 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 CAPZA3Q96KX2 299 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 VEZTQ9HBM0 779 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 PRM3Q9NNZ6 103 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 POLMQ9NP87 494 aaPredicted RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 GJB4Q9NTQ9 266 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 PAG1Q9NWQ8 432 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 GUCA1BQ9UMX6 200 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 SAMM50Q9Y512 469 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 SAR1BQ9Y6B6 198 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 SOS2Q07890 1332 aaPredicted RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 ITIH6Q6UXX5 1313 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 NWD1Q149M9 1564 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 LMO7Q8WWI1 1683 aa7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 DDX60Q8IY21 1712 aaKnown RBP7.23□□□□□ -1.25
SRGAP2-211ENST00000604423 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 DIP2AQ14689 1571 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 POLR2DO15514 142 aaKnown RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 C21orf2O43822 256 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 FSBPO95073 299 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 BMP6P22004 513 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 HOXC9P31274 260 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 CTSOP43234 321 aaPredicted RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 AMPD2Q01433 879 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 MORC3Q14149 939 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 KLHL10Q6JEL2 608 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 TRAPPC11Q7Z392 1133 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 ANKRD18AQ8IVF6 992 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 GSPT2Q8IYD1 628 aaKnown RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 SEPT12Q8IYM1 358 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 NGDNQ8NEJ9 315 aaKnown RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 DBNDD2Q9BQY9 259 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 CENPHQ9H3R5 247 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 ESF1Q9H501 851 aaKnown RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 ABHD10Q9NUJ1 306 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 FAM184BQ9ULE4 1060 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 SPEF2Q9C093 1822 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 OVOS2A0A0G2JMS6 1433 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 GRIN2DO15399 1336 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 MAST3O60307 1309 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 ZMYM6O95789 1325 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 GOLGA6L7A0A1B0GV03 622 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 MYO1FO00160 1098 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 FOXN1O15353 648 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 MEFVO15553 781 aaPredicted RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 TEX33O43247 280 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 HSF2BPO75031 334 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 IPO7O95373 1038 aaKnown RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 GYPCP04921 128 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 SCTRP47872 440 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 PIP4K2AP48426 406 aaPredicted RBP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 METAP2P50579 478 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 PPP2R5AQ15172 486 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 PTPAQ15257 358 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 SAFBQ15424 915 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 ZMYM1Q5SVZ6 1142 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 CEP85LQ5SZL2 805 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 RNF187Q5TA31 235 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms