RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ABHD16BQ9H3Z7 469 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ARIH1Q9Y4X5 557 aaPredicted RBP14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 PCDHA11Q9Y5I1 949 aa14.18□□□□□ -0.14
PDLIM1P1-201ENST00000604187 MYH1P12882 1939 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ATP2A2P16615 1042 aaKnown RBP14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 TMEM31Q5JXX7 168 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 C12orf60Q5U649 245 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 C16orf86Q6ZW13 317 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 NOL8Q76FK4 1167 aaKnown RBP14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ARMCX2Q7L311 632 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 AMOTL1Q8IY63 956 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 WNT8AQ9H1J5 351 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ATP8A2Q9NTI2 1148 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
PDLIM1P1-201ENST00000604187 REV3LO60673 3130 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 USP17L12C9JPN9 530 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 USP17L21D6R901 530 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 RFXAPO00287 272 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 GTPBP6O43824 516 aaPredicted RBP14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 SLFNL1Q499Z3 407 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ZKSCAN2Q63HK3 967 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ERC1Q8IUD2 1116 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ANKRD35Q8N283 1001 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 SLC43A3Q8NBI5 491 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 TRPV6Q9H1D0 765 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 IL1RAPL2Q9NP60 686 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 MTCH2Q9Y6C9 303 aa14.16□□□□□ -0.14
PDLIM1P1-201ENST00000604187 MUC6Q6W4X9 2439 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 FAM86C2PA6NEL3 165 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ZNF316A6NFI3 1004 aaPredicted RBP14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 NDUFB10O96000 172 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CA3P07451 260 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 NKX3-2P78367 333 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ITGA7Q13683 1181 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CCDC144CPQ8IYA2 1237 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 SCLYQ96I15 445 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 KATNBL1Q9H079 304 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CERS4Q9HA82 394 aa14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 RAVER2Q9HCJ3 691 aaKnown RBP14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 CTDP1Q9Y5B0 961 aaPredicted RBP14.15□□□□□ -0.14
PDLIM1P1-201ENST00000604187 ASTN1O14525 1302 aa14.15□□□□□ -0.15
PDLIM1P1-201ENST00000604187 GRIN2DO15399 1336 aa14.15□□□□□ -0.15
PDLIM1P1-201ENST00000604187 NAV1Q8NEY1 1877 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 ATP2A1O14983 1001 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 B4GALT4O60513 344 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 ZBED4O75132 1171 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 CABYRO75952 493 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 PTGS1P23219 599 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 TNFAIP2Q03169 654 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 FSCN1Q16658 493 aaKnown RBP14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 KRT40Q6A162 431 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 TLK2Q86UE8 772 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 ITPRIPQ8IWB1 547 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 RPUSD2Q8IZ73 545 aaKnown RBP14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 PRPF38AQ8NAV1 312 aaKnown RBP14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 KIFC2Q96AC6 838 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 VWCEQ96DN2 955 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 DDRGK1Q96HY6 314 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 FBXO40Q9UH90 709 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 COG5Q9UP83 839 aa14.14□□□□□ -0.15
PDLIM1P1-201ENST00000604187 EPOPA6NHQ4 379 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 F5H6K3 240 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 POU3F3P20264 500 aaPredicted RBP14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 PSMC6P62333 389 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 CNTN2Q02246 1040 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 KLRC3Q07444 240 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 TTLL4Q14679 1199 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 TMEM67Q5HYA8 995 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 CEP85Q6P2H3 762 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 FTSJ3Q8IY81 847 aaKnown RBP14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 KHSRPQ92945 711 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 SLC38A10Q9HBR0 1119 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 C11orf16Q9NQ32 467 aa14.13□□□□□ -0.15
PDLIM1P1-201ENST00000604187 MYO5AQ9Y4I1 1855 aaKnown RBP14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 TLL1O43897 1013 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 ADD2P35612 726 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 CTR9Q6PD62 1173 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 CHST13Q8NET6 341 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 ARNTL2Q8WYA1 636 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 AP5M1Q9H0R1 490 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 GNEQ9Y223 722 aaKnown RBP14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 SLC4A4Q9Y6R1 1079 aa14.12□□□□□ -0.15
PDLIM1P1-201ENST00000604187 DYNC1LI2O43237 492 aaPredicted RBP14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 ZEB2O60315 1214 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 CHGBP05060 677 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 PFKMP08237 780 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 SMPD1P17405 629 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 DEFB128Q7Z7B8 93 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 RHPN1Q8TCX5 695 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 HLA-CQ95604 372 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 AGBL1Q96MI9 1066 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 SEZ6LQ9BYH1 1024 aa14.11□□□□□ -0.15
PDLIM1P1-201ENST00000604187 ALDH8A1Q9H2A2 487 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms