RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 ZBED4O75132 1171 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 PBX2P40425 430 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 GJA9P57773 515 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 TMEM240Q5SV17 173 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 MFSD5Q6N075 450 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 ARMCX2Q7L311 632 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 MKL1Q969V6 931 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 PRDM6Q9NQX0 595 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 REV3LO60673 3130 aa20.12■□□□□ 0.81
CCDC12-210ENST00000604181 ASTN1O14525 1302 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 ELP1O95163 1332 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.11■□□□□ 0.81
CCDC12-210ENST00000604181 RNF113AO15541 343 aaKnown RBP20.11■□□□□ 0.81
CCDC12-210ENST00000604181 CSF2RAP15509 400 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 RASIP1Q5U651 963 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 CCDC144CPQ8IYA2 1237 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 ANKRD35Q8N283 1001 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 CHMP4CQ96CF2 233 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 GLT1D1Q96MS3 346 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 SEC62Q99442 399 aaKnown RBP20.11■□□□□ 0.81
CCDC12-210ENST00000604181 ZNF576Q9H609 170 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 HOMER2Q9NSB8 354 aa20.11■□□□□ 0.81
CCDC12-210ENST00000604181 ACRP10323 421 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 TDO2P48775 406 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 BEX3Q00994 111 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 FAM126BQ8IXS8 530 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 TIFAQ96CG3 184 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 PPP1R12CQ9BZL4 782 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 ABHD16BQ9H3Z7 469 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 FEM1BQ9UK73 627 aa20.1■□□□□ 0.81
CCDC12-210ENST00000604181 ZNF536O15090 1300 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 ARVCFO00192 962 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 GNASQ5JWF2 1037 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 SLFN13Q68D06 897 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 RASGRP2Q7LDG7 609 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 ZNF444Q8N0Y2 327 aaPredicted RBP20.09■□□□□ 0.81
CCDC12-210ENST00000604181 FAM133AQ8N9E0 248 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 GMCL1P1Q8NEA9 526 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 CHST13Q8NET6 341 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 PBX4Q9BYU1 374 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 RCAN3Q9UKA8 241 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 NCOR1O75376 2440 aa20.09■□□□□ 0.81
CCDC12-210ENST00000604181 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 A0A0U1RQG5 324 aaPredicted RBP20.08■□□□□ 0.81
CCDC12-210ENST00000604181 SOWAHBA6NEL2 793 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 TTLL1O95922 423 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 TMEM63BQ5T3F8 832 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 ZNF365Q70YC5 407 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 IFNL3Q8IZI9 196 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 PCSK9Q8NBP7 692 aaKnown RBP20.08■□□□□ 0.81
CCDC12-210ENST00000604181 VTI1AQ96AJ9 217 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 AGBL1Q96MI9 1066 aa20.08■□□□□ 0.81
CCDC12-210ENST00000604181 A1CFQ9NQ94 594 aaKnown RBP20.08■□□□□ 0.81
CCDC12-210ENST00000604181 CTDP1Q9Y5B0 961 aaPredicted RBP20.08■□□□□ 0.81
CCDC12-210ENST00000604181 XIRP2A4UGR9 3374 aa20.08■□□□□ 0.8
CCDC12-210ENST00000604181 LRRC37A2A6NM11 1700 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 UMODL1Q5DID0 1318 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 TMEM232C9JQI7 657 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 CD4P01730 458 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 APPP05067 770 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 BMP3P12645 472 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 CYP2C18P33260 490 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 OAZ1P54368 228 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 SNAP25P60880 206 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 NKX3-2P78367 333 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 PPIGQ13427 754 aaKnown RBP eCLIP20.07■□□□□ 0.81e-21■■□□□ 13.4
CCDC12-210ENST00000604181 NEDD1Q8NHV4 660 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 FBXO40Q9UH90 709 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 LCTP09848 1927 aa20.07■□□□□ 0.8
CCDC12-210ENST00000604181 GRIN2DO15399 1336 aa20.06■□□□□ 0.8
CCDC12-210ENST00000604181 MROH7Q68CQ1 1323 aa20.06■□□□□ 0.8
CCDC12-210ENST00000604181 PATL2C9JE40 543 aaKnown RBP20.06■□□□□ 0.8
CCDC12-210ENST00000604181 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
CCDC12-210ENST00000604181 CXCL17Q6UXB2 119 aa20.06■□□□□ 0.8
CCDC12-210ENST00000604181 PRDM12Q9H4Q4 367 aa20.06■□□□□ 0.8
CCDC12-210ENST00000604181 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
CCDC12-210ENST00000604181 INCENPQ9NQS7 918 aa20.06■□□□□ 0.8
CCDC12-210ENST00000604181 CXXC1Q9P0U4 656 aaPredicted RBP20.06■□□□□ 0.8
CCDC12-210ENST00000604181 GNEQ9Y223 722 aaKnown RBP20.06■□□□□ 0.8
CCDC12-210ENST00000604181 FOXP2O15409 715 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 TFAP4Q01664 338 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 ADGRE1Q14246 886 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 SLC43A3Q8NBI5 491 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 OTUD7AQ8TE49 926 aaPredicted RBP20.05■□□□□ 0.8
CCDC12-210ENST00000604181 CHMP4BQ9H444 224 aaKnown RBP20.05■□□□□ 0.8
CCDC12-210ENST00000604181 ACAD9Q9H845 621 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 SPC25Q9HBM1 224 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 PDGFCQ9NRA1 345 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 RNF146Q9NTX7 359 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 SYNPO2Q9UMS6 1093 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 GBF1Q92538 1859 aa20.05■□□□□ 0.8
CCDC12-210ENST00000604181 ZFYP08048 801 aaPredicted RBP20.04■□□□□ 0.8
CCDC12-210ENST00000604181 TSPY3P0CV98 308 aa20.04■□□□□ 0.8
CCDC12-210ENST00000604181 TSPY8P0CW00 308 aa20.04■□□□□ 0.8
CCDC12-210ENST00000604181 GNAT2P19087 354 aa20.04■□□□□ 0.8
CCDC12-210ENST00000604181 TNFAIP2Q03169 654 aa20.04■□□□□ 0.8
CCDC12-210ENST00000604181 MUM1L1Q5H9M0 696 aa20.04■□□□□ 0.8
CCDC12-210ENST00000604181 CCDC129Q6ZRS4 1044 aa20.04■□□□□ 0.8
CCDC12-210ENST00000604181 PPM1EQ8WY54 764 aa20.04■□□□□ 0.8
CCDC12-210ENST00000604181 PURBQ96QR8 312 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms