RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 ERVV-1B6SEH8 477 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 ATMINO43313 823 aaPredicted RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 B3GALNT1O75752 331 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 RBP3P10745 1247 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 TRIM21P19474 475 aaKnown RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 MATR3P43243 847 aaKnown RBP eCLIP8.54□□□□□ -1.04
HCG18-244ENST00000602516 SH3BGRP55822 239 aaPredicted RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 FAM160A1Q05DH4 1040 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 CCDC93Q567U6 631 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 LRRC49Q8IUZ0 686 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 TMEM151BQ8IW70 566 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 GPHNQ9NQX3 736 aaPredicted RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 HOMER3Q9NSC5 361 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 RGS17Q9UGC6 210 aaPredicted RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 RIC1Q4ADV7 1423 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 TBKBP1A7MCY6 615 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 RNF113AO15541 343 aaKnown RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 FOXD2O60548 495 aaPredicted RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 TSPAN7P41732 249 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 UBE2HP62256 183 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 IFIT5Q13325 482 aaKnown RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 MFSD10Q14728 455 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 MYBPC3Q14896 1274 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 SPDYCQ5MJ68 293 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 SPATS2Q86XZ4 545 aaKnown RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 DZIP1Q86YF9 867 aaKnown RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 TTLL11Q8NHH1 800 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 FAM76AQ8TAV0 307 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 TCEANC2Q96MN5 208 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 VPS33BQ9H267 617 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 TTC12Q9H892 705 aaPredicted RBP8.54□□□□□ -1.04
HCG18-244ENST00000602516 WDR37Q9Y2I8 494 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 NWD2Q9ULI1 1742 aa8.54□□□□□ -1.04
HCG18-244ENST00000602516 RPSAP08865 295 aaKnown RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 PDCP20941 246 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 ERCC5P28715 1186 aaPredicted RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 HNRNPH1P31943 449 aaKnown RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 IL6STP40189 918 aaPredicted RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 PABPC4Q13310 644 aaKnown RBP eCLIP8.53□□□□□ -1.04
HCG18-244ENST00000602516 BTG3Q14201 252 aaPredicted RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 STOX1Q6ZVD7 989 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 ZNF397Q8NF99 534 aaPredicted RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 XAGE2Q96GT9 111 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 C8orf37Q96NL8 207 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 IER2Q9BTL4 223 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 AGXT2Q9BYV1 514 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 ZBTB1Q9Y2K1 713 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 ZNF330Q9Y3S2 320 aaPredicted RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 MAST3O60307 1309 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 LRP5O75197 1615 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 VIL1P09327 827 aaKnown RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 HSPD1P10809 573 aaKnown RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 KIF11P52732 1056 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 IGBP1P78318 339 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 AMPD3Q01432 767 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 SIM2Q14190 667 aaPredicted RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 DHX8Q14562 1220 aaKnown RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 SKIV2LQ15477 1246 aaKnown RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 CCDC144BQ3MJ40 725 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 SLFNL1Q499Z3 407 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 CCDC158Q5M9N0 1113 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 EGFLAMQ63HQ2 1017 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 LLGL2Q6P1M3 1020 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 MIPOL1Q8TD10 442 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 ATRIPQ8WXE1 791 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 GTF3C6Q969F1 213 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 DHTKD1Q96HY7 919 aaPredicted RBP8.53□□□□□ -1.04
HCG18-244ENST00000602516 UROC1Q96N76 676 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 RTEL1Q9NZ71 1219 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 KIAA1468Q9P260 1216 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.53□□□□□ -1.04
HCG18-244ENST00000602516 ZNF510Q9Y2H8 683 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 AFF2P51816 1311 aa8.53□□□□□ -1.04
HCG18-244ENST00000602516 A0A0B4J203 849 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 TMEM221A6NGB7 291 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 ENO4A6NNW6 628 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 M0R2C6 588 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 ADORA1P30542 326 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 INHBCP55103 352 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 EXOSC10Q01780 885 aaKnown RBP8.52□□□□□ -1.04
HCG18-244ENST00000602516 Q4G0T1 1027 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 ZNF772Q68DY9 489 aaPredicted RBP8.52□□□□□ -1.04
HCG18-244ENST00000602516 FIP1L1Q6UN15 594 aaKnown RBP8.52□□□□□ -1.04
HCG18-244ENST00000602516 Q6ZUG5 572 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 C14orf80Q86SX3 495 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 CEP57L1Q8IYX8 460 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 SYNE4Q8N205 404 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 LILRB1Q8NHL6 650 aaPredicted RBP8.52□□□□□ -1.04
HCG18-244ENST00000602516 SAAL1Q96ER3 474 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.04
HCG18-244ENST00000602516 FAM117AQ9C073 453 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 SSX2IPQ9Y2D8 614 aa8.52□□□□□ -1.04
HCG18-244ENST00000602516 DDX60Q8IY21 1712 aaKnown RBP8.52□□□□□ -1.05
HCG18-244ENST00000602516 ARAP2Q8WZ64 1704 aa8.52□□□□□ -1.05
HCG18-244ENST00000602516 SLIT2O94813 1529 aa8.52□□□□□ -1.05
HCG18-244ENST00000602516 CSPG5O95196 566 aa8.52□□□□□ -1.05
HCG18-244ENST00000602516 ZFYP08048 801 aaPredicted RBP8.52□□□□□ -1.05
HCG18-244ENST00000602516 GPTP24298 496 aa8.52□□□□□ -1.05
HCG18-244ENST00000602516 CTSWP56202 376 aa8.52□□□□□ -1.05
HCG18-244ENST00000602516 DNM1Q05193 864 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms