RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SLC1A4P43007 532 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 KCNA10Q16322 511 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 ARMCX2Q7L311 632 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 FAM160B2Q86V87 743 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 KLHDC9Q8NEP7 349 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 CHURC1Q8WUH1 139 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 NUP133Q8WUM0 1156 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 STAG1Q8WVM7 1258 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 GMCL1Q96IK5 515 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 CRBNQ96SW2 442 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 ABHD16BQ9H3Z7 469 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 STARD7Q9NQZ5 370 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 IL17RBQ9NRM6 502 aa15.61■□□□□ 0.09
RPS28-204ENST00000602140 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
RPS28-204ENST00000602140 MYADML2A6NDP7 307 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 MOXD2PA6NHM9 499 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 ADCY6O43306 1168 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 NMT2O60551 498 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 RAG1P15918 1043 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 IRX5P78411 483 aaPredicted RBP15.6■□□□□ 0.09
RPS28-204ENST00000602140 CNTN2Q02246 1040 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 CCDC144BQ3MJ40 725 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 PPP4R3BQ5MIZ7 849 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 ZNF697Q5TEC3 545 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 VPS53Q5VIR6 699 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 CCSAPQ6IQ19 270 aaPredicted RBP15.6■□□□□ 0.09
RPS28-204ENST00000602140 KCTD1Q719H9 257 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 CCDC144CPQ8IYA2 1237 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 EVI5LQ96CN4 794 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 AGBL1Q96MI9 1066 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 GUCD1Q96NT3 240 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 ACAD9Q9H845 621 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 TMEM39AQ9NV64 488 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 ZNF536O15090 1300 aa15.6■□□□□ 0.09
RPS28-204ENST00000602140 KIAA0355O15063 1070 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 RANBP6O60518 1105 aaKnown RBP15.59■□□□□ 0.09
RPS28-204ENST00000602140 C6orf222P0C671 652 aaPredicted RBP15.59■□□□□ 0.09
RPS28-204ENST00000602140 FAAP100Q0VG06 881 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 RCSD1Q6JBY9 416 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 ANKRD33Q7Z3H0 272 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 TOX2Q96NM4 488 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 SPC25Q9HBM1 224 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 RNF146Q9NTX7 359 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 ANAPC4Q9UJX5 808 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 MTMR7Q9Y216 660 aa15.59■□□□□ 0.09
RPS28-204ENST00000602140 DCDC2CA8MYV0 355 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 PLA2G6O60733 806 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 ALAS1P13196 640 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 CST5P28325 142 aaPredicted RBP15.58■□□□□ 0.08
RPS28-204ENST00000602140 PDE1AP54750 535 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 EPHB4P54760 987 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 SNAP25P60880 206 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 CCDC174Q6PII3 467 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 RASGRP2Q7LDG7 609 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 FAM133AQ8N9E0 248 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 PCSK9Q8NBP7 692 aaKnown RBP15.58■□□□□ 0.08
RPS28-204ENST00000602140 GLT1D1Q96MS3 346 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 TRERF1Q96PN7 1200 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 A1CFQ9NQ94 594 aaKnown RBP15.58■□□□□ 0.08
RPS28-204ENST00000602140 HELLSQ9NRZ9 838 aa15.58■□□□□ 0.08
RPS28-204ENST00000602140 SOWAHBA6NEL2 793 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 ASGR1P07306 291 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 GJA9P57773 515 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 SMAD3P84022 425 aaKnown RBP15.57■□□□□ 0.08
RPS28-204ENST00000602140 TKFCQ3LXA3 575 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 VTI1AQ96AJ9 217 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 FAM227BQ96M60 508 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 KATNBL1Q9H079 304 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 UPF3AQ9H1J1 476 aaKnown RBP15.57■□□□□ 0.08
RPS28-204ENST00000602140 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 PRR12Q9ULL5 1215 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 ELP1O95163 1332 aa15.57■□□□□ 0.08
RPS28-204ENST00000602140 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.56■□□□□ 0.08
RPS28-204ENST00000602140 ORC4O43929 436 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 FPGSQ05932 587 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 HDAC1Q13547 482 aaPredicted RBP15.56■□□□□ 0.08
RPS28-204ENST00000602140 ALX1Q15699 326 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 CCDC96Q2M329 555 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 MUM1L1Q5H9M0 696 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 GNASQ5JWF2 1037 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 RNPC3Q96LT9 517 aaKnown RBP15.56■□□□□ 0.08
RPS28-204ENST00000602140 SEMA6BQ9H3T3 888 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 MCM3APO60318 1980 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 UNC80Q8N2C7 3258 aa15.56■□□□□ 0.08
RPS28-204ENST00000602140 MROH7Q68CQ1 1323 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 A0A0D9SFI3 127 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 ASB14A6NK59 587 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 TIMP1P01033 207 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 FGAP02671 866 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 FGRP09769 529 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 NOVP48745 357 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 CDK7P50613 346 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 TNFAIP2Q03169 654 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 RRP12Q5JTH9 1297 aaKnown RBP15.55■□□□□ 0.08
RPS28-204ENST00000602140 NOL8Q76FK4 1167 aaKnown RBP15.55■□□□□ 0.08
RPS28-204ENST00000602140 CCPG1Q9ULG6 757 aa15.55■□□□□ 0.08
RPS28-204ENST00000602140 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
RPS28-204ENST00000602140 ASTN1O14525 1302 aa15.54■□□□□ 0.08
RPS28-204ENST00000602140 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms