RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 CXCL11O14625 94 aa20.08■□□□□ 0.81
DDX49-213ENST00000602113 KIF3CO14782 793 aa20.08■□□□□ 0.81
DDX49-213ENST00000602113 FLOT1O75955 427 aa20.08■□□□□ 0.81
DDX49-213ENST00000602113 NOM1Q5C9Z4 860 aaKnown RBP20.08■□□□□ 0.81
DDX49-213ENST00000602113 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.81
DDX49-213ENST00000602113 BLIDQ8IZY5 108 aa20.08■□□□□ 0.81
DDX49-213ENST00000602113 PRPF38AQ8NAV1 312 aaKnown RBP20.08■□□□□ 0.81
DDX49-213ENST00000602113 GDPD2Q9HCC8 539 aa20.08■□□□□ 0.81
DDX49-213ENST00000602113 PCDHA1Q9Y5I3 950 aa20.08■□□□□ 0.81
DDX49-213ENST00000602113 A0A0G2JLL6 359 aaPredicted RBP20.07■□□□□ 0.8
DDX49-213ENST00000602113 ESYT2A0FGR8 921 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 FAM205CA6NFA0 338 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 M0R2N6 131 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
DDX49-213ENST00000602113 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
DDX49-213ENST00000602113 EARS2Q5JPH6 523 aaKnown RBP20.07■□□□□ 0.8
DDX49-213ENST00000602113 GALNT17Q6IS24 598 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 PRRT2Q7Z6L0 340 aaPredicted RBP20.07■□□□□ 0.8
DDX49-213ENST00000602113 FBXO11Q86XK2 927 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 AMNQ9BXJ7 453 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 BRMS1Q9HCU9 246 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 PPP1R9AQ9ULJ8 1098 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 PTPRFP10586 1907 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 TREML2Q5T2D2 321 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 CCDC174Q6PII3 467 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 FTOQ9C0B1 505 aaKnown RBP eCLIP20.07■□□□□ 0.8
DDX49-213ENST00000602113 C6orf50Q9HD87 102 aa20.07■□□□□ 0.8
DDX49-213ENST00000602113 KRT85P78386 507 aa20.06■□□□□ 0.8
DDX49-213ENST00000602113 CATSPERGQ6ZRH7 1159 aa20.06■□□□□ 0.8
DDX49-213ENST00000602113 RASGRP4Q8TDF6 673 aa20.06■□□□□ 0.8
DDX49-213ENST00000602113 USP28Q96RU2 1077 aa20.06■□□□□ 0.8
DDX49-213ENST00000602113 FIBPO43427 364 aa20.05■□□□□ 0.8
DDX49-213ENST00000602113 ADCY7P51828 1080 aa20.05■□□□□ 0.8
DDX49-213ENST00000602113 MOGSQ13724 837 aa20.05■□□□□ 0.8
DDX49-213ENST00000602113 USH1GQ495M9 461 aa20.05■□□□□ 0.8
DDX49-213ENST00000602113 ZNF396Q96N95 335 aaPredicted RBP20.05■□□□□ 0.8
DDX49-213ENST00000602113 PCDHA6Q9UN73 950 aa20.05■□□□□ 0.8
DDX49-213ENST00000602113 PCDHA8Q9Y5H6 950 aa20.05■□□□□ 0.8
DDX49-213ENST00000602113 MYH15Q9Y2K3 1946 aa20.05■□□□□ 0.8
DDX49-213ENST00000602113 USP17L15C9J2P7 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L13C9JLJ4 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L11C9JVI0 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L18D6R9N7 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L22D6RA61 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L17D6RBQ6 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L19D6RCP7 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L20D6RJB6 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 GNA11P29992 359 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 TOB1P50616 345 aaPredicted RBP20.04■□□□□ 0.8
DDX49-213ENST00000602113 USP17L24Q0WX57 530 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 ATL3Q6DD88 541 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 GADL1Q6ZQY3 521 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 PROCA1Q8NCQ7 364 aaPredicted RBP20.04■□□□□ 0.8
DDX49-213ENST00000602113 ATG4CQ96DT6 458 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 WNK4Q96J92 1243 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 SLC38A10Q9HBR0 1119 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 RIC8AQ9NPQ8 531 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 ZNF536O15090 1300 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 PASKQ96RG2 1323 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 LOC285556D6RIA3 1793 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 TCHHQ07283 1943 aa20.04■□□□□ 0.8
DDX49-213ENST00000602113 DDX11L8A8MPP1 907 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 PRPF40AO75400 957 aaKnown RBP20.03■□□□□ 0.8
DDX49-213ENST00000602113 CEBPZQ03701 1054 aaKnown RBP20.03■□□□□ 0.8
DDX49-213ENST00000602113 COG2Q14746 738 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 TMEM87AQ8NBN3 555 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 LMBRD1Q9NUN5 540 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 CLIC4Q9Y696 253 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 RLFQ13129 1914 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 PARP14Q460N5 1801 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 GOLGA6L22H0YM25 854 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 VWA5AO00534 786 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 DSG3P32926 999 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 PIK3AP1Q6ZUJ8 805 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 PSTPIP2Q9H939 334 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 RTEL1Q9NZ71 1219 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 CFAP45Q9UL16 551 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 ADAMTS5Q9UNA0 930 aa20.03■□□□□ 0.8
DDX49-213ENST00000602113 TRPM7Q96QT4 1865 aa20.02■□□□□ 0.8
DDX49-213ENST00000602113 OPLAHO14841 1288 aa20.02■□□□□ 0.8
DDX49-213ENST00000602113 ICAM1P05362 532 aa20.02■□□□□ 0.8
DDX49-213ENST00000602113 NBR1Q14596 966 aa20.02■□□□□ 0.8
DDX49-213ENST00000602113 BICD2Q8TD16 824 aa20.02■□□□□ 0.8
DDX49-213ENST00000602113 LEO1Q8WVC0 666 aaPredicted RBP20.02■□□□□ 0.8
DDX49-213ENST00000602113 AGBL1Q96MI9 1066 aa20.02■□□□□ 0.8
DDX49-213ENST00000602113 SCAND2PQ9GZW5 306 aaPredicted RBP20.02■□□□□ 0.8
DDX49-213ENST00000602113 TMEM260Q9NX78 707 aa20.02■□□□□ 0.8
DDX49-213ENST00000602113 BIN2Q9UBW5 565 aaPredicted RBP20.02■□□□□ 0.8
DDX49-213ENST00000602113 HOXA7P31268 230 aaPredicted RBP20.01■□□□□ 0.79
DDX49-213ENST00000602113 SNAPC2Q13487 334 aa20.01■□□□□ 0.79
DDX49-213ENST00000602113 UBE2SQ16763 222 aa20.01■□□□□ 0.79
DDX49-213ENST00000602113 REXO1Q8N1G1 1221 aaKnown RBP20.01■□□□□ 0.79
DDX49-213ENST00000602113 REPS2Q8NFH8 660 aa20.01■□□□□ 0.79
DDX49-213ENST00000602113 CUL5Q93034 780 aa20.01■□□□□ 0.79
DDX49-213ENST00000602113 RAVER2Q9HCJ3 691 aaKnown RBP20.01■□□□□ 0.79
DDX49-213ENST00000602113 RCOR1Q9UKL0 485 aa20.01■□□□□ 0.79
DDX49-213ENST00000602113 SPDYE16A6NNV3 312 aaPredicted RBP20■□□□□ 0.79
DDX49-213ENST00000602113 ZBED4O75132 1171 aa20■□□□□ 0.79
DDX49-213ENST00000602113 NASPP49321 788 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms