RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 IRX3P78415 501 aaPredicted RBP10.07□□□□□ -0.8
DDX49-211ENST00000601772 FPGSQ05932 587 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 GJC2Q5T442 439 aaPredicted RBP10.07□□□□□ -0.8
DDX49-211ENST00000601772 SLC39A5Q6ZMH5 540 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 TMEM179Q6ZVK1 233 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 CLEC10AQ8IUN9 316 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 TRMT44Q8IYL2 757 aaKnown RBP10.07□□□□□ -0.8
DDX49-211ENST00000601772 SOCS4Q8WXH5 440 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 RILPL2Q969X0 211 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 C12orf42Q96LP6 360 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 CCDC17Q96LX7 622 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 KIAA1683Q9H0B3 1180 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 HELLSQ9NRZ9 838 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 ZNFX1Q9P2E3 1918 aaKnown RBP10.07□□□□□ -0.8
DDX49-211ENST00000601772 CFAP54Q96N23 3096 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 CHD9Q3L8U1 2897 aa10.07□□□□□ -0.8
DDX49-211ENST00000601772 A0A0D9SFI3 127 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 A0A1W2PRG0 241 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 KBTBD13C9JR72 458 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 PI4K2BG5E9Z4 385 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 FOXP2O15409 715 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 BRD1O95696 1058 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
DDX49-211ENST00000601772 HERVK_113P62684 666 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 NMIQ13287 307 aaPredicted RBP10.06□□□□□ -0.8
DDX49-211ENST00000601772 VPS53Q5VIR6 699 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 FAM227BQ96M60 508 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 PHOX2BQ99453 314 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 NACAP1Q9BZK3 213 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 NAPBQ9H115 298 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 PDCL3Q9H2J4 239 aa10.06□□□□□ -0.8
DDX49-211ENST00000601772 XRCC5P13010 732 aaKnown RBP10.05□□□□□ -0.8
DDX49-211ENST00000601772 RAG1P15918 1043 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 VCAM1P19320 739 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 RASA1P20936 1047 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 ITGB8P26012 769 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 ICA1Q05084 483 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 TICAM2Q86XR7 235 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 SIAH1Q8IUQ4 282 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 LPAR1Q92633 364 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 ARHGEF10LQ9HCE6 1279 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 MORF4L1Q9UBU8 362 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 DDX20Q9UHI6 824 aaKnown RBP10.05□□□□□ -0.8
DDX49-211ENST00000601772 ATP6V1DQ9Y5K8 247 aa10.05□□□□□ -0.8
DDX49-211ENST00000601772 CHD7Q9P2D1 2997 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 PEX10O60683 326 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 PRDM1O75626 825 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 EEF2P13639 858 aaKnown RBP10.04□□□□□ -0.8
DDX49-211ENST00000601772 RGS2P41220 211 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 ATP2B2Q01814 1243 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 PPARAQ07869 468 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 CAVIN1Q6NZI2 390 aaKnown RBP10.04□□□□□ -0.8
DDX49-211ENST00000601772 CATSPERGQ6ZRH7 1159 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 ZNF589Q86UQ0 364 aaPredicted RBP10.04□□□□□ -0.8
DDX49-211ENST00000601772 CCAR1Q8IX12 1150 aaKnown RBP10.04□□□□□ -0.8
DDX49-211ENST00000601772 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 FERMT2Q96AC1 680 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 TMX3Q96JJ7 454 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 APBA2Q99767 749 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
DDX49-211ENST00000601772 NKX2-4Q9H2Z4 354 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 RPAP3Q9H6T3 665 aaPredicted RBP10.04□□□□□ -0.8
DDX49-211ENST00000601772 SH2D4AQ9H788 454 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 RBPJLQ9UBG7 517 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 MSRAQ9UJ68 235 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 ZKSCAN5Q9Y2L8 839 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 TMX2Q9Y320 296 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 ZDBF2Q9HCK1 2354 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 CCDC171Q6TFL3 1326 aa10.04□□□□□ -0.8
DDX49-211ENST00000601772 TLL1O43897 1013 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 PRPF40AO75400 957 aaKnown RBP10.03□□□□□ -0.8
DDX49-211ENST00000601772 CLTBP09497 229 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 NEK4P51957 841 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 TLE2Q04725 743 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 CTDSPL2Q05D32 466 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 KIAA1755Q5JYT7 1200 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 MFSD14CQ5VZR4 134 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 ZNF444Q8N0Y2 327 aaPredicted RBP10.03□□□□□ -0.8
DDX49-211ENST00000601772 PAGR1Q9BTK6 254 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 ZNF287Q9HBT7 754 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 TXNRD2Q9NNW7 524 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 USP34Q70CQ2 3546 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 ZNF236Q9UL36 1845 aa10.03□□□□□ -0.8
DDX49-211ENST00000601772 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
DDX49-211ENST00000601772 MSCO60682 206 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms