RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 LRRC41Q15345 812 aa26.73■■□□□ 1.87
SSBP4-209ENST00000601357 ANKRD35Q8N283 1001 aa26.73■■□□□ 1.87
SSBP4-209ENST00000601357 AGBL1Q96MI9 1066 aa26.73■■□□□ 1.87
SSBP4-209ENST00000601357 KBTBD13C9JR72 458 aa26.72■■□□□ 1.87
SSBP4-209ENST00000601357 SNAI1O95863 264 aaPredicted RBP26.72■■□□□ 1.87
SSBP4-209ENST00000601357 IRX6P78412 446 aaPredicted RBP26.72■■□□□ 1.87
SSBP4-209ENST00000601357 TTC14Q96N46 770 aa26.72■■□□□ 1.87
SSBP4-209ENST00000601357 RNF41Q9H4P4 317 aaPredicted RBP26.72■■□□□ 1.87
SSBP4-209ENST00000601357 HOMER2Q9NSB8 354 aa26.72■■□□□ 1.87
SSBP4-209ENST00000601357 CNPY2Q9Y2B0 182 aa26.72■■□□□ 1.87
SSBP4-209ENST00000601357 NEDD4P46934 1319 aa26.71■■□□□ 1.87
SSBP4-209ENST00000601357 ZNF213O14771 459 aa26.71■■□□□ 1.87
SSBP4-209ENST00000601357 GSPT1P15170 499 aaKnown RBP26.71■■□□□ 1.87
SSBP4-209ENST00000601357 TKFCQ3LXA3 575 aa26.71■■□□□ 1.87
SSBP4-209ENST00000601357 BTNL9Q6UXG8 535 aa26.71■■□□□ 1.87
SSBP4-209ENST00000601357 DSCC1Q9BVC3 393 aa26.71■■□□□ 1.87
SSBP4-209ENST00000601357 ACAD9Q9H845 621 aa26.71■■□□□ 1.87
SSBP4-209ENST00000601357 RARBP10826 455 aa26.7■■□□□ 1.86
SSBP4-209ENST00000601357 AKR1A1P14550 325 aa26.7■■□□□ 1.86
SSBP4-209ENST00000601357 NT5C2P49902 561 aa26.7■■□□□ 1.86
SSBP4-209ENST00000601357 TTC22Q5TAA0 569 aa26.7■■□□□ 1.86
SSBP4-209ENST00000601357 XPNPEP3Q9NQH7 507 aa26.7■■□□□ 1.86
SSBP4-209ENST00000601357 RNF146Q9NTX7 359 aa26.7■■□□□ 1.86
SSBP4-209ENST00000601357 MTMR7Q9Y216 660 aa26.7■■□□□ 1.86
SSBP4-209ENST00000601357 MCM3APO60318 1980 aa26.69■■□□□ 1.86
SSBP4-209ENST00000601357 MAGEA10P43363 369 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-209ENST00000601357 ATN1P54259 1190 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-209ENST00000601357 SNAP25P60880 206 aa26.69■■□□□ 1.86
SSBP4-209ENST00000601357 CCDC96Q2M329 555 aa26.69■■□□□ 1.86
SSBP4-209ENST00000601357 IL25Q9H293 177 aa26.69■■□□□ 1.86
SSBP4-209ENST00000601357 A1CFQ9NQ94 594 aaKnown RBP26.69■■□□□ 1.86
SSBP4-209ENST00000601357 PDHBP11177 359 aa26.68■■□□□ 1.86
SSBP4-209ENST00000601357 SNX17Q15036 470 aa26.68■■□□□ 1.86
SSBP4-209ENST00000601357 TTBK2Q6IQ55 1244 aa26.68■■□□□ 1.86
SSBP4-209ENST00000601357 CCDC174Q6PII3 467 aa26.68■■□□□ 1.86
SSBP4-209ENST00000601357 FAM133AQ8N9E0 248 aa26.68■■□□□ 1.86
SSBP4-209ENST00000601357 ESR2Q92731 530 aa26.68■■□□□ 1.86
SSBP4-209ENST00000601357 RANBP17Q9H2T7 1088 aaKnown RBP26.68■■□□□ 1.86
SSBP4-209ENST00000601357 PCDH10Q9P2E7 1040 aa26.68■■□□□ 1.86
SSBP4-209ENST00000601357 SNHG28P0DPA3 235 aa26.67■■□□□ 1.86
SSBP4-209ENST00000601357 SLC16A2P36021 539 aa26.67■■□□□ 1.86
SSBP4-209ENST00000601357 ADCYAP1R1P41586 468 aa26.67■■□□□ 1.86
SSBP4-209ENST00000601357 CNTN2Q02246 1040 aa26.67■■□□□ 1.86
SSBP4-209ENST00000601357 SLC39A5Q6ZMH5 540 aa26.67■■□□□ 1.86
SSBP4-209ENST00000601357 LENG1Q96BZ8 264 aaPredicted RBP26.67■■□□□ 1.86
SSBP4-209ENST00000601357 TRERF1Q96PN7 1200 aa26.67■■□□□ 1.86
SSBP4-209ENST00000601357 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.67■■□□□ 1.86
SSBP4-209ENST00000601357 PHF24Q9UPV7 400 aa26.67■■□□□ 1.86
SSBP4-209ENST00000601357 ADAMTS4O75173 837 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 PGK1P00558 417 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 MYCNP04198 464 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-209ENST00000601357 ICAM1P05362 532 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 ALAS1P13196 640 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 RTP1P59025 263 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 KATNBL1Q9H079 304 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 FAM184BQ9ULE4 1060 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 LCTP09848 1927 aa26.66■■□□□ 1.86
SSBP4-209ENST00000601357 FRMPD2Q68DX3 1309 aaPredicted RBP26.65■■□□□ 1.86
SSBP4-209ENST00000601357 ACVR2BQ13705 512 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 MUM1L1Q5H9M0 696 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 SYDE2Q5VT97 1194 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 C1orf53Q5VUE5 145 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 ARMCX2Q7L311 632 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 RNF180Q86T96 592 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 DGKHQ86XP1 1220 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 ABHD16BQ9H3Z7 469 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 CCPG1Q9ULG6 757 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 LTBP2Q14767 1821 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 LRRC37A2A6NM11 1700 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 SYNRGQ9UMZ2 1314 aa26.65■■□□□ 1.86
SSBP4-209ENST00000601357 SOWAHBA6NEL2 793 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 POTEB2H3BUK9 544 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 ZNF543Q08ER8 600 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 CCDC144CPQ8IYA2 1237 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 ZKSCAN3Q9BRR0 538 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 GPCPD1Q9NPB8 672 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 CYP39A1Q9NYL5 469 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 CTNNA3Q9UI47 895 aa26.64■■□□□ 1.86
SSBP4-209ENST00000601357 ZHX1Q9UKY1 873 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-209ENST00000601357 ASTN1O14525 1302 aa26.64■■□□□ 1.85
SSBP4-209ENST00000601357 ADCY6O43306 1168 aa26.63■■□□□ 1.85
SSBP4-209ENST00000601357 KDM4AO75164 1064 aa26.63■■□□□ 1.85
SSBP4-209ENST00000601357 IMMTQ16891 758 aaKnown RBP26.63■■□□□ 1.85
SSBP4-209ENST00000601357 ANKS1AQ92625 1134 aa26.63■■□□□ 1.85
SSBP4-209ENST00000601357 FERMT2Q96AC1 680 aa26.63■■□□□ 1.85
SSBP4-209ENST00000601357 RAD50Q92878 1312 aa26.63■■□□□ 1.85
SSBP4-209ENST00000601357 DUSP11O75319 330 aaKnown RBP26.62■■□□□ 1.85
SSBP4-209ENST00000601357 CCDC144BQ3MJ40 725 aa26.62■■□□□ 1.85
SSBP4-209ENST00000601357 KLHDC9Q8NEP7 349 aa26.62■■□□□ 1.85
SSBP4-209ENST00000601357 ATP11BQ9Y2G3 1177 aa26.62■■□□□ 1.85
SSBP4-209ENST00000601357 B4E1Z4 1266 aa26.61■■□□□ 1.85
SSBP4-209ENST00000601357 SOX1O00570 391 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-209ENST00000601357 TRIM60Q495X7 471 aa26.61■■□□□ 1.85
SSBP4-209ENST00000601357 CCDC178Q5BJE1 867 aa26.61■■□□□ 1.85
SSBP4-209ENST00000601357 CCSAPQ6IQ19 270 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-209ENST00000601357 IQCA1Q86XH1 822 aa26.61■■□□□ 1.85
SSBP4-209ENST00000601357 TSEN34Q9BSV6 310 aaKnown RBP26.61■■□□□ 1.85
SSBP4-209ENST00000601357 ZSWIM5Q9P217 1185 aa26.61■■□□□ 1.85
SSBP4-209ENST00000601357 A0A1W2PQ45 241 aaPredicted RBP26.6■■□□□ 1.85
SSBP4-209ENST00000601357 A0A1W2PQY0 241 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms