RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FLOT1O75955 427 aa25.93■■□□□ 1.74
IRF3-228ENST00000601291 NR5A1Q13285 461 aa25.93■■□□□ 1.74
IRF3-228ENST00000601291 NPY5RQ15761 445 aa25.93■■□□□ 1.74
IRF3-228ENST00000601291 FBXO11Q86XK2 927 aa25.93■■□□□ 1.74
IRF3-228ENST00000601291 BLIDQ8IZY5 108 aa25.93■■□□□ 1.74
IRF3-228ENST00000601291 OXER1Q8TDS5 423 aa25.93■■□□□ 1.74
IRF3-228ENST00000601291 CNKSR2Q8WXI2 1034 aa25.93■■□□□ 1.74
IRF3-228ENST00000601291 RANBP17Q9H2T7 1088 aaKnown RBP25.93■■□□□ 1.74
IRF3-228ENST00000601291 SMCO2A6NFE2 343 aa25.92■■□□□ 1.74
IRF3-228ENST00000601291 CXCL11O14625 94 aa25.92■■□□□ 1.74
IRF3-228ENST00000601291 SAMD1Q6SPF0 538 aaPredicted RBP25.92■■□□□ 1.74
IRF3-228ENST00000601291 BICD2Q8TD16 824 aa25.92■■□□□ 1.74
IRF3-228ENST00000601291 OPTNQ96CV9 577 aa25.92■■□□□ 1.74
IRF3-228ENST00000601291 SLC10A4Q96EP9 437 aa25.92■■□□□ 1.74
IRF3-228ENST00000601291 FBXO28Q9NVF7 368 aa25.92■■□□□ 1.74
IRF3-228ENST00000601291 PCDHA1Q9Y5I3 950 aa25.92■■□□□ 1.74
IRF3-228ENST00000601291 MYH15Q9Y2K3 1946 aa25.91■■□□□ 1.74
IRF3-228ENST00000601291 FIBPO43427 364 aa25.91■■□□□ 1.74
IRF3-228ENST00000601291 SCAND2PQ9GZW5 306 aaPredicted RBP25.91■■□□□ 1.74
IRF3-228ENST00000601291 IRF6O14896 467 aa25.9■■□□□ 1.74
IRF3-228ENST00000601291 ITGBL1O95965 494 aaPredicted RBP25.9■■□□□ 1.74
IRF3-228ENST00000601291 ADCY7P51828 1080 aa25.9■■□□□ 1.74
IRF3-228ENST00000601291 SNAP25P60880 206 aa25.9■■□□□ 1.74
IRF3-228ENST00000601291 PPP1R9AQ9ULJ8 1098 aa25.9■■□□□ 1.74
IRF3-228ENST00000601291 KCNH4Q9UQ05 1017 aa25.9■■□□□ 1.74
IRF3-228ENST00000601291 GLT8D2Q9H1C3 349 aa25.9■■□□□ 1.74
IRF3-228ENST00000601291 A0A0G2JLL6 359 aaPredicted RBP25.89■■□□□ 1.73
IRF3-228ENST00000601291 FDX1P10109 184 aa25.89■■□□□ 1.73
IRF3-228ENST00000601291 RILPL1Q5EBL4 403 aa25.89■■□□□ 1.73
IRF3-228ENST00000601291 PRRT2Q7Z6L0 340 aaPredicted RBP25.89■■□□□ 1.73
IRF3-228ENST00000601291 PROCA1Q8NCQ7 364 aaPredicted RBP25.89■■□□□ 1.73
IRF3-228ENST00000601291 TNFRSF25Q93038 417 aa25.89■■□□□ 1.73
IRF3-228ENST00000601291 TFIP11Q9UBB9 837 aaKnown RBP25.89■■□□□ 1.73
IRF3-228ENST00000601291 USP17L15C9J2P7 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L13C9JLJ4 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L11C9JVI0 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L18D6R9N7 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L22D6RA61 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L17D6RBQ6 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L19D6RCP7 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L20D6RJB6 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USP17L24Q0WX57 530 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 USH1GQ495M9 461 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 CCDC174Q6PII3 467 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 TMEM87AQ8NBN3 555 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 CUL5Q93034 780 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 GDPD2Q9HCC8 539 aa25.88■■□□□ 1.73
IRF3-228ENST00000601291 NOL7Q9UMY1 257 aaKnown RBP25.88■■□□□ 1.73
IRF3-228ENST00000601291 CTDP1Q9Y5B0 961 aaPredicted RBP25.88■■□□□ 1.73
IRF3-228ENST00000601291 REXO1Q8N1G1 1221 aaKnown RBP25.87■■□□□ 1.73
IRF3-228ENST00000601291 SPATA32Q96LK8 384 aa25.87■■□□□ 1.73
IRF3-228ENST00000601291 USP28Q96RU2 1077 aa25.87■■□□□ 1.73
IRF3-228ENST00000601291 RIC8AQ9NPQ8 531 aa25.87■■□□□ 1.73
IRF3-228ENST00000601291 LOC285556D6RIA3 1793 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 CCDC194A0A1B0GVG4 234 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 ZBED4O75132 1171 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 PRPF40AO75400 957 aaKnown RBP25.86■■□□□ 1.73
IRF3-228ENST00000601291 MRPL12P52815 198 aaKnown RBP25.86■■□□□ 1.73
IRF3-228ENST00000601291 GADL1Q6ZQY3 521 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 CATSPERGQ6ZRH7 1159 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 POLR3EQ9NVU0 708 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 PNMA2Q9UL42 364 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 PCDHA6Q9UN73 950 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 PCDHA8Q9Y5H6 950 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 MYPNQ86TC9 1320 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 M0R2N6 131 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 CEBPZQ03701 1054 aaKnown RBP25.86■■□□□ 1.73
IRF3-228ENST00000601291 COG2Q14746 738 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 PIK3AP1Q6ZUJ8 805 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 KRT25Q7Z3Z0 450 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 PSTPIP2Q9H939 334 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 SLC38A10Q9HBR0 1119 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 RTEL1Q9NZ71 1219 aa25.86■■□□□ 1.73
IRF3-228ENST00000601291 PTPRFP10586 1907 aa25.85■■□□□ 1.73
IRF3-228ENST00000601291 ICAM1P05362 532 aa25.85■■□□□ 1.73
IRF3-228ENST00000601291 SNAPC2Q13487 334 aa25.85■■□□□ 1.73
IRF3-228ENST00000601291 NBR1Q14596 966 aa25.85■■□□□ 1.73
IRF3-228ENST00000601291 FASTKD5Q7L8L6 764 aaKnown RBP25.85■■□□□ 1.73
IRF3-228ENST00000601291 ELP1O95163 1332 aa25.85■■□□□ 1.73
IRF3-228ENST00000601291 DSG3P32926 999 aa25.84■■□□□ 1.73
IRF3-228ENST00000601291 CST9Q5W186 159 aa25.84■■□□□ 1.73
IRF3-228ENST00000601291 ANO1Q5XXA6 986 aa25.84■■□□□ 1.73
IRF3-228ENST00000601291 RASGRP4Q8TDF6 673 aa25.84■■□□□ 1.73
IRF3-228ENST00000601291 LEO1Q8WVC0 666 aaPredicted RBP25.84■■□□□ 1.73
IRF3-228ENST00000601291 LMBRD1Q9NUN5 540 aa25.84■■□□□ 1.73
IRF3-228ENST00000601291 HOXC10Q9NYD6 342 aa25.84■■□□□ 1.73
IRF3-228ENST00000601291 ABCB11O95342 1321 aa25.84■■□□□ 1.73
IRF3-228ENST00000601291 TRPM7Q96QT4 1865 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 YEATS4O95619 227 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 TRAPPC10P48553 1259 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 NASPP49321 788 aaPredicted RBP25.83■■□□□ 1.73
IRF3-228ENST00000601291 EARS2Q5JPH6 523 aaKnown RBP25.83■■□□□ 1.73
IRF3-228ENST00000601291 TREML2Q5T2D2 321 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 TEX2Q8IWB9 1127 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 ATG4CQ96DT6 458 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 WNK4Q96J92 1243 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 FTOQ9C0B1 505 aaKnown RBP eCLIP25.83■■□□□ 1.73
IRF3-228ENST00000601291 CCPG1Q9ULG6 757 aa25.83■■□□□ 1.73
IRF3-228ENST00000601291 MRPL11Q9Y3B7 192 aaKnown RBP25.83■■□□□ 1.73
IRF3-228ENST00000601291 VWA5AO00534 786 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms