RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 VPS53Q5VIR6 699 aa21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 ANKRD35Q8N283 1001 aa21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 STAG1Q8WVM7 1258 aa21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 ZHX1Q9UKY1 873 aaPredicted RBP21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 CTDP1Q9Y5B0 961 aaPredicted RBP21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 LAMA2P24043 3122 aaKnown RBP21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 MOXD2PA6NHM9 499 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 CTAGE5O15320 804 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 FGRP09769 529 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 CNTN2Q02246 1040 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 CTDSPL2Q05D32 466 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 ARMCX2Q7L311 632 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 FAM133AQ8N9E0 248 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 AGBL1Q96MI9 1066 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 UPF3AQ9H1J1 476 aaKnown RBP21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 ABHD16BQ9H3Z7 469 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 ANAPC4Q9UJX5 808 aa21.37■■□□□ 1.01
CHMP2A-208ENST00000601220 NMT2O60551 498 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 PQBP1O60828 265 aaKnown RBP21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 MCCP23508 829 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 CDK7P50613 346 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 STAT2P52630 851 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 NKX3-2P78367 333 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 CCDC144BQ3MJ40 725 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 FAM160B2Q86V87 743 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 CHURC1Q8WUH1 139 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 STARD7Q9NQZ5 370 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 A0A0C4DFX4 3053 aa21.36■■□□□ 1.01
CHMP2A-208ENST00000601220 SOWAHBA6NEL2 793 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 SLC1A4P43007 532 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 GJA9P57773 515 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 ALX1Q15699 326 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 ANKRD45Q5TZF3 282 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 RCSD1Q6JBY9 416 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 RASGRP2Q7LDG7 609 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 CCDC144CPQ8IYA2 1237 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 NUP133Q8WUM0 1156 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 FAM161BQ96MY7 647 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 ACAD9Q9H845 621 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 A1CFQ9NQ94 594 aaKnown RBP21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 HOMER2Q9NSB8 354 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 MYH4Q9Y623 1939 aa21.35■■□□□ 1.01
CHMP2A-208ENST00000601220 PDE1AP54750 535 aa21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 SMAD3P84022 425 aaKnown RBP21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 KCTD1Q719H9 257 aa21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 EVI5LQ96CN4 794 aa21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 CRBNQ96SW2 442 aa21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 SEMA6BQ9H3T3 888 aa21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 TMEM39AQ9NV64 488 aa21.34■■□□□ 1.01
CHMP2A-208ENST00000601220 ASTN1O14525 1302 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 ELP1O95163 1332 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 TSPY2A6NKD2 308 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 ORC4O43929 436 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 ASGR1P07306 291 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 HDAC1Q13547 482 aaPredicted RBP21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 TKFCQ3LXA3 575 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 PPP4R3BQ5MIZ7 849 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 ZNF697Q5TEC3 545 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 TTYH1Q9H313 450 aaPredicted RBP21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 HELLSQ9NRZ9 838 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 RNF146Q9NTX7 359 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 TBX21Q9UL17 535 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 STX8Q9UNK0 236 aa21.33■■□□□ 1.01
CHMP2A-208ENST00000601220 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.32■■□□□ 1
CHMP2A-208ENST00000601220 DCDC2CA8MYV0 355 aa21.32■■□□□ 1
CHMP2A-208ENST00000601220 C6orf222P0C671 652 aaPredicted RBP21.32■■□□□ 1
CHMP2A-208ENST00000601220 RAG1P15918 1043 aa21.32■■□□□ 1
CHMP2A-208ENST00000601220 SNAP25P60880 206 aa21.32■■□□□ 1
CHMP2A-208ENST00000601220 TRERF1Q96PN7 1200 aa21.32■■□□□ 1
CHMP2A-208ENST00000601220 CDX2Q99626 313 aaPredicted RBP21.32■■□□□ 1
CHMP2A-208ENST00000601220 PRR12Q9ULL5 1215 aa21.32■■□□□ 1
CHMP2A-208ENST00000601220 MUM1L1Q5H9M0 696 aa21.31■■□□□ 1
CHMP2A-208ENST00000601220 PCSK9Q8NBP7 692 aaKnown RBP21.31■■□□□ 1
CHMP2A-208ENST00000601220 FAM227BQ96M60 508 aa21.31■■□□□ 1
CHMP2A-208ENST00000601220 GLT1D1Q96MS3 346 aa21.31■■□□□ 1
CHMP2A-208ENST00000601220 GNEQ9Y223 722 aaKnown RBP21.31■■□□□ 1
CHMP2A-208ENST00000601220 DDX49Q9Y6V7 483 aaKnown RBP21.31■■□□□ 1
CHMP2A-208ENST00000601220 RANBP6O60518 1105 aaKnown RBP21.3■■□□□ 1
CHMP2A-208ENST00000601220 TIMP1P01033 207 aa21.3■■□□□ 1
CHMP2A-208ENST00000601220 FGAP02671 866 aa21.3■■□□□ 1
CHMP2A-208ENST00000601220 FPGSQ05932 587 aa21.3■■□□□ 1
CHMP2A-208ENST00000601220 GNASQ5JWF2 1037 aa21.3■■□□□ 1
CHMP2A-208ENST00000601220 CCDC174Q6PII3 467 aa21.3■■□□□ 1
CHMP2A-208ENST00000601220 A0A0D9SFI3 127 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 ARVCFO00192 962 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 ALAS1P13196 640 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 IKQ13123 557 aaPredicted RBP21.29■■□□□ 1
CHMP2A-208ENST00000601220 TTBK2Q6IQ55 1244 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 BTNL9Q6UXG8 535 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 C16orf59Q7L2K0 433 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 TICAM2Q86XR7 235 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 RNPC3Q96LT9 517 aaKnown RBP21.29■■□□□ 1
CHMP2A-208ENST00000601220 SPC25Q9HBM1 224 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 CYP39A1Q9NYL5 469 aa21.29■■□□□ 1
CHMP2A-208ENST00000601220 ISY1Q9ULR0 285 aaKnown RBP21.29■■□□□ 1
CHMP2A-208ENST00000601220 ASB14A6NK59 587 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 PTGS1P23219 599 aa21.28■■□□□ 1
CHMP2A-208ENST00000601220 TNFAIP2Q03169 654 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms