RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 LTBP2Q14767 1821 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 TRIM43BA6NCK2 446 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 ORC4O43929 436 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 RANBP6O60518 1105 aaKnown RBP20.12■□□□□ 0.81
SCAF1-204ENST00000601038 NMT2O60551 498 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 FGRP09769 529 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 NOVP48745 357 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 IKQ13123 557 aaPredicted RBP20.12■□□□□ 0.81
SCAF1-204ENST00000601038 MCMDC2Q4G0Z9 681 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 KLHDC9Q8NEP7 349 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 BADQ92934 168 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 TRIM43Q96BQ3 446 aaPredicted RBP20.12■□□□□ 0.81
SCAF1-204ENST00000601038 ACAD9Q9H845 621 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 HOMER2Q9NSB8 354 aa20.12■□□□□ 0.81
SCAF1-204ENST00000601038 MOXD2PA6NHM9 499 aa20.11■□□□□ 0.81
SCAF1-204ENST00000601038 POTEB2H3BUK9 544 aa20.11■□□□□ 0.81
SCAF1-204ENST00000601038 ACLYP53396 1101 aa20.11■□□□□ 0.81
SCAF1-204ENST00000601038 TKFCQ3LXA3 575 aa20.11■□□□□ 0.81
SCAF1-204ENST00000601038 FAM109BQ6ICB4 259 aaPredicted RBP20.11■□□□□ 0.81
SCAF1-204ENST00000601038 CCSAPQ6IQ19 270 aaPredicted RBP20.11■□□□□ 0.81
SCAF1-204ENST00000601038 ARMCX2Q7L311 632 aa20.11■□□□□ 0.81
SCAF1-204ENST00000601038 NUP133Q8WUM0 1156 aa20.11■□□□□ 0.81
SCAF1-204ENST00000601038 AGBL1Q96MI9 1066 aa20.11■□□□□ 0.81
SCAF1-204ENST00000601038 FGAP02671 866 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 CLTBP09497 229 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 CST5P28325 142 aaPredicted RBP20.1■□□□□ 0.81
SCAF1-204ENST00000601038 SHHQ15465 462 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 KCNA10Q16322 511 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 CCDC144BQ3MJ40 725 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 KCTD1Q719H9 257 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 CCDC144CPQ8IYA2 1237 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 FAM133AQ8N9E0 248 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 SLC17A8Q8NDX2 589 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 CHMP4CQ96CF2 233 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 FAM227BQ96M60 508 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 TOX2Q96NM4 488 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 STARD7Q9NQZ5 370 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 RNF146Q9NTX7 359 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 STXBP5LQ9Y2K9 1186 aa20.1■□□□□ 0.81
SCAF1-204ENST00000601038 A0A0D9SFI3 127 aa20.09■□□□□ 0.81
SCAF1-204ENST00000601038 CNTN2Q02246 1040 aa20.09■□□□□ 0.81
SCAF1-204ENST00000601038 ANKRD33Q7Z3H0 272 aa20.09■□□□□ 0.81
SCAF1-204ENST00000601038 TRERF1Q96PN7 1200 aa20.09■□□□□ 0.81
SCAF1-204ENST00000601038 A1CFQ9NQ94 594 aaKnown RBP20.09■□□□□ 0.81
SCAF1-204ENST00000601038 PRR12Q9ULL5 1215 aa20.09■□□□□ 0.81
SCAF1-204ENST00000601038 MCM3APO60318 1980 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 KIAA0355O15063 1070 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 ADCY6O43306 1168 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 PQBP1O60828 265 aaKnown RBP20.08■□□□□ 0.81
SCAF1-204ENST00000601038 HSPD1P10809 573 aaKnown RBP20.08■□□□□ 0.81
SCAF1-204ENST00000601038 ALAS1P13196 640 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 C9orf50Q5SZB4 431 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 SMC5Q8IY18 1101 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 PCSK9Q8NBP7 692 aaKnown RBP20.08■□□□□ 0.81
SCAF1-204ENST00000601038 LNPKQ9C0E8 428 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 KATNBL1Q9H079 304 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 UPF3AQ9H1J1 476 aaKnown RBP20.08■□□□□ 0.81
SCAF1-204ENST00000601038 SPC25Q9HBM1 224 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 TOMM22Q9NS69 142 aa20.08■□□□□ 0.81
SCAF1-204ENST00000601038 ELP1O95163 1332 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 MYADML2A6NDP7 307 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 ASB14A6NK59 587 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 C6orf222P0C671 652 aaPredicted RBP20.07■□□□□ 0.8
SCAF1-204ENST00000601038 ITGB8P26012 769 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 GJA9P57773 515 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 CCDC174Q6PII3 467 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 DCAF4Q8WV16 495 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
SCAF1-204ENST00000601038 TCP11L1Q9NUJ3 509 aa20.07■□□□□ 0.8
SCAF1-204ENST00000601038 ZMYM6O95789 1325 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 SOWAHBA6NEL2 793 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 DCDC2CA8MYV0 355 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 TRIM6-TRIM34B2RNG4 842 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 RAG1P15918 1043 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 SNAP25P60880 206 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 FAAP100Q0VG06 881 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 NMIQ13287 307 aaPredicted RBP20.06■□□□□ 0.8
SCAF1-204ENST00000601038 RRP12Q5JTH9 1297 aaKnown RBP20.06■□□□□ 0.8
SCAF1-204ENST00000601038 RASGRP2Q7LDG7 609 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 ZNF589Q86UQ0 364 aaPredicted RBP20.06■□□□□ 0.8
SCAF1-204ENST00000601038 GLT1D1Q96MS3 346 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 TMEM39AQ9NV64 488 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 MTMR7Q9Y216 660 aa20.06■□□□□ 0.8
SCAF1-204ENST00000601038 ASGR1P07306 291 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 TOP1P11387 765 aaKnown RBP20.05■□□□□ 0.8
SCAF1-204ENST00000601038 NKX3-2P78367 333 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 IRX5P78411 483 aaPredicted RBP20.05■□□□□ 0.8
SCAF1-204ENST00000601038 CCDC96Q2M329 555 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 MUM1L1Q5H9M0 696 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 GNASQ5JWF2 1037 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 BTNL9Q6UXG8 535 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 RILPL2Q969X0 211 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 TMEM47Q9BQJ4 181 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 CCPG1Q9ULG6 757 aa20.05■□□□□ 0.8
SCAF1-204ENST00000601038 CCDC171Q6TFL3 1326 aa20.04■□□□□ 0.8
SCAF1-204ENST00000601038 ICAM1P05362 532 aa20.04■□□□□ 0.8
SCAF1-204ENST00000601038 PCP11498 1178 aaKnown RBP20.04■□□□□ 0.8
SCAF1-204ENST00000601038 CDK7P50613 346 aa20.04■□□□□ 0.8
SCAF1-204ENST00000601038 TNFAIP2Q03169 654 aa20.04■□□□□ 0.8
SCAF1-204ENST00000601038 TTBK2Q6IQ55 1244 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms