RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ARMCX2Q7L311 632 aa20.08■□□□□ 0.81
USE1-208ENST00000600970 ANKRD35Q8N283 1001 aa20.08■□□□□ 0.81
USE1-208ENST00000600970 ATXN2LQ8WWM7 1075 aaKnown RBP20.08■□□□□ 0.81
USE1-208ENST00000600970 KIFC2Q96AC6 838 aa20.08■□□□□ 0.81
USE1-208ENST00000600970 MKNK2Q9HBH9 465 aa20.08■□□□□ 0.81
USE1-208ENST00000600970 SLC38A10Q9HBR0 1119 aa20.08■□□□□ 0.81
USE1-208ENST00000600970 CTDP1Q9Y5B0 961 aaPredicted RBP20.08■□□□□ 0.81
USE1-208ENST00000600970 CTAGE5O15320 804 aa20.07■□□□□ 0.8
USE1-208ENST00000600970 TLR3O15455 904 aaKnown RBP20.07■□□□□ 0.8
USE1-208ENST00000600970 PSRC1Q6PGN9 363 aaPredicted RBP20.07■□□□□ 0.8
USE1-208ENST00000600970 STRBPQ96SI9 672 aaKnown RBP20.07■□□□□ 0.8
USE1-208ENST00000600970 KATNBL1Q9H079 304 aa20.07■□□□□ 0.8
USE1-208ENST00000600970 ZBTB40Q9NUA8 1239 aa20.07■□□□□ 0.8
USE1-208ENST00000600970 CLIP2Q9UDT6 1046 aa20.07■□□□□ 0.8
USE1-208ENST00000600970 IGKV6D-41A0A0C4DH26 115 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 CD4P01730 458 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 CYP2C18P33260 490 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 ADGRE1Q14246 886 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 CCDC144CPQ8IYA2 1237 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 CHST13Q8NET6 341 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 ASB2Q96Q27 587 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 IL23AQ9NPF7 189 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 FBXO40Q9UH90 709 aa20.06■□□□□ 0.8
USE1-208ENST00000600970 GSG1L2A8MUP6 293 aa20.05■□□□□ 0.8
USE1-208ENST00000600970 MINDY4BA8MYZ0 360 aa20.05■□□□□ 0.8
USE1-208ENST00000600970 NKX3-2P78367 333 aa20.05■□□□□ 0.8
USE1-208ENST00000600970 HERVK_113Q902F9 699 aa20.05■□□□□ 0.8
USE1-208ENST00000600970 FEM1BQ9UK73 627 aa20.05■□□□□ 0.8
USE1-208ENST00000600970 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.04■□□□□ 0.8
USE1-208ENST00000600970 MS4A1P11836 297 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 OAZ1P54368 228 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 BEX3Q00994 111 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 RAB30Q15771 203 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 GIMAP6Q6P9H5 292 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 MKL1Q969V6 931 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 CXXC1Q9P0U4 656 aaPredicted RBP20.04■□□□□ 0.8
USE1-208ENST00000600970 MSRAQ9UJ68 235 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 DDX19BQ9UMR2 479 aa20.04■□□□□ 0.8
USE1-208ENST00000600970 ASTN1O14525 1302 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 LRRC37A2A6NM11 1700 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 IGFBP4P22692 258 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 CNTN2Q02246 1040 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 CCDC85BQ15834 202 aaPredicted RBP20.03■□□□□ 0.8
USE1-208ENST00000600970 SLC43A3Q8NBI5 491 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 CEP95Q96GE4 821 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 NKX2-4Q9H2Z4 354 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
USE1-208ENST00000600970 FGBP02675 491 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 MRPS5P82675 430 aaKnown RBP20.02■□□□□ 0.8
USE1-208ENST00000600970 TNFAIP2Q03169 654 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 CXCL17Q6UXB2 119 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 ZNF444Q8N0Y2 327 aaPredicted RBP20.02■□□□□ 0.8
USE1-208ENST00000600970 LRRC47Q8N1G4 583 aaKnown RBP20.02■□□□□ 0.8
USE1-208ENST00000600970 FAM133AQ8N9E0 248 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 OSBP2Q969R2 916 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 MTIF3Q9H2K0 278 aaKnown RBP20.02■□□□□ 0.8
USE1-208ENST00000600970 HIPK3Q9H422 1215 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 HOMER2Q9NSB8 354 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 MTMR4Q9NYA4 1195 aa20.02■□□□□ 0.8
USE1-208ENST00000600970 YBX2Q9Y2T7 364 aaKnown RBP20.02■□□□□ 0.8
USE1-208ENST00000600970 UMODL1Q5DID0 1318 aa20.02■□□□□ 0.79
USE1-208ENST00000600970 PRDM1O75626 825 aa20.01■□□□□ 0.79
USE1-208ENST00000600970 GMCL1P1Q8NEA9 526 aa20.01■□□□□ 0.79
USE1-208ENST00000600970 ADAMTS19Q8TE59 1207 aa20.01■□□□□ 0.79
USE1-208ENST00000600970 SLC28A3Q9HAS3 691 aa20.01■□□□□ 0.79
USE1-208ENST00000600970 EPB41L4AQ9HCS5 686 aaPredicted RBP20.01■□□□□ 0.79
USE1-208ENST00000600970 SYNPO2Q9UMS6 1093 aa20.01■□□□□ 0.79
USE1-208ENST00000600970 GNEQ9Y223 722 aaKnown RBP20.01■□□□□ 0.79
USE1-208ENST00000600970 CHD9Q3L8U1 2897 aa20■□□□□ 0.79
USE1-208ENST00000600970 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
USE1-208ENST00000600970 SMARCA5O60264 1052 aaPredicted RBP20■□□□□ 0.79
USE1-208ENST00000600970 TTLL1O95922 423 aa20■□□□□ 0.79
USE1-208ENST00000600970 FDX1P10109 184 aa20■□□□□ 0.79
USE1-208ENST00000600970 BMP3P12645 472 aa20■□□□□ 0.79
USE1-208ENST00000600970 ITGA7Q13683 1181 aa20■□□□□ 0.79
USE1-208ENST00000600970 SLFN13Q68D06 897 aa20■□□□□ 0.79
USE1-208ENST00000600970 NOL8Q76FK4 1167 aaKnown RBP20■□□□□ 0.79
USE1-208ENST00000600970 OTOP2Q7RTS6 562 aa20■□□□□ 0.79
USE1-208ENST00000600970 TLK2Q86UE8 772 aa20■□□□□ 0.79
USE1-208ENST00000600970 APPBP2Q92624 585 aa20■□□□□ 0.79
USE1-208ENST00000600970 LRRCC1Q9C099 1032 aa20■□□□□ 0.79
USE1-208ENST00000600970 ACAD9Q9H845 621 aa20■□□□□ 0.79
USE1-208ENST00000600970 A1CFQ9NQ94 594 aaKnown RBP20■□□□□ 0.79
USE1-208ENST00000600970 RAPGEFL1Q9UHV5 662 aa20■□□□□ 0.79
USE1-208ENST00000600970 GRIN2DO15399 1336 aa20■□□□□ 0.79
USE1-208ENST00000600970 CABYRO75952 493 aa19.99■□□□□ 0.79
USE1-208ENST00000600970 PTGS1P23219 599 aa19.99■□□□□ 0.79
USE1-208ENST00000600970 CCL23P55773 120 aa19.99■□□□□ 0.79
USE1-208ENST00000600970 KBTBD3Q8NAB2 608 aa19.99■□□□□ 0.79
USE1-208ENST00000600970 UHRF1Q96T88 793 aaPredicted RBP19.99■□□□□ 0.79
USE1-208ENST00000600970 ZNF287Q9HBT7 754 aa19.99■□□□□ 0.79
USE1-208ENST00000600970 ZNF536O15090 1300 aa19.99■□□□□ 0.79
USE1-208ENST00000600970 ASB14A6NK59 587 aa19.98■□□□□ 0.79
USE1-208ENST00000600970 TMEM232C9JQI7 657 aa19.98■□□□□ 0.79
USE1-208ENST00000600970 GPAA1O43292 621 aa19.98■□□□□ 0.79
USE1-208ENST00000600970 TDO2P48775 406 aa19.98■□□□□ 0.79
USE1-208ENST00000600970 FSCN1Q16658 493 aaKnown RBP19.98■□□□□ 0.79
USE1-208ENST00000600970 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
USE1-208ENST00000600970 NOC4LQ9BVI4 516 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms