RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 CD320Q9NPF0 282 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
HIF3A-219ENST00000600879 MTCH2Q9Y6C9 303 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 ELP1O95163 1332 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 SYNGAP1Q96PV0 1343 aa11.99□□□□□ -0.49
HIF3A-219ENST00000600879 MYO9BQ13459 2157 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-219ENST00000600879 ERC2O15083 957 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 CTAGE5O15320 804 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 CD4P01730 458 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 CHGBP05060 677 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 CA3P07451 260 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 COPB2P35606 906 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 PSMC6P62333 389 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 NOL8Q76FK4 1167 aaKnown RBP11.98□□□□□ -0.49
HIF3A-219ENST00000600879 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 PPP1R13LQ8WUF5 828 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 VWCEQ96DN2 955 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 CCDC17Q96LX7 622 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 FGD4Q96M96 766 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 SLF1Q9BQI6 1058 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 SPC25Q9HBM1 224 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 SLC4A7Q9Y6M7 1214 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 MYH8P13535 1937 aa11.98□□□□□ -0.49
HIF3A-219ENST00000600879 ASTN1O14525 1302 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 GRIN2DO15399 1336 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 DNAJC25-GNG10A0A024R161 153 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 USP17L21D6R901 530 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 TLL1O43897 1013 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 CST5P28325 142 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-219ENST00000600879 GJA9P57773 515 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 TTLL4Q14679 1199 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 TMEM63BQ5T3F8 832 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 C12orf60Q5U649 245 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 TMED8Q6PL24 325 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-219ENST00000600879 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 MSL3Q8N5Y2 521 aaKnown RBP11.97□□□□□ -0.49
HIF3A-219ENST00000600879 ARNTL2Q8WYA1 636 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 UPF3AQ9H1J1 476 aaKnown RBP11.97□□□□□ -0.49
HIF3A-219ENST00000600879 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
HIF3A-219ENST00000600879 KANSL2Q9H9L4 492 aa11.97□□□□□ -0.49
HIF3A-219ENST00000600879 RAVER2Q9HCJ3 691 aaKnown RBP11.97□□□□□ -0.49
HIF3A-219ENST00000600879 CTDP1Q9Y5B0 961 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-219ENST00000600879 BAZ2AQ9UIF9 1905 aaKnown RBP11.96□□□□□ -0.49
HIF3A-219ENST00000600879 ATP2A2P16615 1042 aaKnown RBP11.96□□□□□ -0.49
HIF3A-219ENST00000600879 AAK1Q2M2I8 961 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 CEP85Q6P2H3 762 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 C16orf86Q6ZW13 317 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 DEFB128Q7Z7B8 93 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 AMOTL1Q8IY63 956 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
HIF3A-219ENST00000600879 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 KIFC2Q96AC6 838 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 CHMP4CQ96CF2 233 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 NOC4LQ9BVI4 516 aaKnown RBP11.96□□□□□ -0.49
HIF3A-219ENST00000600879 ABHD16BQ9H3Z7 469 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 HOMER2Q9NSB8 354 aa11.96□□□□□ -0.49
HIF3A-219ENST00000600879 NCOR1O75376 2440 aa11.96□□□□□ -0.5
HIF3A-219ENST00000600879 LRRC37A2A6NM11 1700 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 B4GALT4O60513 344 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 RLBP1P12271 317 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 CNTN2Q02246 1040 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 CCDC144CPQ8IYA2 1237 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 UIMC1Q96RL1 719 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.95□□□□□ -0.5
HIF3A-219ENST00000600879 ATP8A2Q9NTI2 1148 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 PCDHA11Q9Y5I1 949 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 SLC4A4Q9Y6R1 1079 aa11.95□□□□□ -0.5
HIF3A-219ENST00000600879 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-219ENST00000600879 ZBED4O75132 1171 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 NDUFB10O96000 172 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 CYP2C9P11712 490 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 ADD2P35612 726 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 TNFAIP2Q03169 654 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 ITGA7Q13683 1181 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-219ENST00000600879 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
HIF3A-219ENST00000600879 ERC1Q8IUD2 1116 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 RHPN1Q8TCX5 695 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
HIF3A-219ENST00000600879 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
HIF3A-219ENST00000600879 PRRC2BQ5JSZ5 2229 aaKnown RBP11.94□□□□□ -0.5
HIF3A-219ENST00000600879 MCM3APO60318 1980 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 F5H6K3 240 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 DYNC1LI2O43237 492 aaPredicted RBP11.93□□□□□ -0.5
HIF3A-219ENST00000600879 IFIT2P09913 472 aaKnown RBP11.93□□□□□ -0.5
HIF3A-219ENST00000600879 KLRC3Q07444 240 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 TMEM67Q5HYA8 995 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 EEPD1Q7L9B9 569 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
HIF3A-219ENST00000600879 ANKS1AQ92625 1134 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 HLA-CQ95604 372 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 DDRGK1Q96HY6 314 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms