RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 PFKFB2O60825 505 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 VCAM1P19320 739 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 KIF5BP33176 963 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 SLC1A4P43007 532 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 GNAQP50148 359 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 HMGCS2P54868 508 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 ZNF543Q08ER8 600 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 KIAA1755Q5JYT7 1200 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 BTNL9Q6UXG8 535 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 FANCBQ8NB91 859 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 LZTS2Q9BRK4 669 aa13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 RBM28Q9NW13 759 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-207ENST00000600804 GOLGA8BA8MQT2 603 aa13.55□□□□□ -0.24
CHMP2A-207ENST00000600804 PARP1P09874 1014 aaKnown RBP13.55□□□□□ -0.24
CHMP2A-207ENST00000600804 BMP3P12645 472 aa13.55□□□□□ -0.24
CHMP2A-207ENST00000600804 PABPC4Q13310 644 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHMP2A-207ENST00000600804 CTCFLQ8NI51 663 aaPredicted RBP13.55□□□□□ -0.24
CHMP2A-207ENST00000600804 MAD2L2Q9UI95 211 aa13.55□□□□□ -0.24
CHMP2A-207ENST00000600804 ZMYND8Q9ULU4 1186 aaPredicted RBP13.55□□□□□ -0.24
CHMP2A-207ENST00000600804 PRUNE2Q8WUY3 3088 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L15C9J2P7 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L13C9JLJ4 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L11C9JVI0 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L18D6R9N7 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L22D6RA61 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L17D6RBQ6 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L19D6RCP7 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L20D6RJB6 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 DLL1O00548 723 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 DHX16O60231 1041 aaKnown RBP13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 CD2BP2O95400 341 aaKnown RBP13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 METAP2P50579 478 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 USP17L24Q0WX57 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 ME3Q16798 604 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 RTN1Q16799 776 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 FAM160B2Q86V87 743 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 CHURC1Q8WUH1 139 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 TRIB2Q92519 343 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 COA7Q96BR5 231 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 ASCC2Q9H1I8 757 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 FEM1BQ9UK73 627 aa13.54□□□□□ -0.24
CHMP2A-207ENST00000600804 ZNFX1Q9P2E3 1918 aaKnown RBP13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 GOLGA8AA7E2F4 631 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 HMGCRP04035 888 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 FDX1P10109 184 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 LBX2Q6XYB7 198 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 CATSPERGQ6ZRH7 1159 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 NECAB2Q7Z6G3 386 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 SLC17A8Q8NDX2 589 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 GTF3C6Q969F1 213 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 TMX3Q96JJ7 454 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 SPZ1Q9BXG8 430 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 PFASO15067 1338 aa13.53□□□□□ -0.24
CHMP2A-207ENST00000600804 IFNAR1P17181 557 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 SYN1P17600 705 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 BMP8BP34820 402 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 STAT2P52630 851 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 FUT2Q10981 343 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 SCRN1Q12765 414 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 CUL4AQ13619 759 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 ZYXQ15942 572 aaKnown RBP13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 NTRK3Q16288 839 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 FAM83BQ5T0W9 1011 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 MAP3K21Q5TCX8 1036 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 Q7L0L9 218 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 ANKLE1Q8NAG6 615 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 MYL10Q9BUA6 226 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 RPAP3Q9H6T3 665 aaPredicted RBP13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 RIOX1Q9H6W3 641 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 TXNRD2Q9NNW7 524 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 TSHZ2Q9NRE2 1034 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 MORF4L1Q9UBU8 362 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 ADAMTS5Q9UNA0 930 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 MYH6P13533 1939 aa13.52□□□□□ -0.25
CHMP2A-207ENST00000600804 A0A0G2JMZ2 1700 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 RPTORQ8N122 1335 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 KLRF2D3W0D1 207 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 K7ELQ4 463 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 CDC27P30260 824 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 GCLCP48506 637 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 COG2Q14746 738 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 CCDC96Q2M329 555 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 CPLX2Q6PUV4 134 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 STAG2Q8N3U4 1231 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 PRPF38AQ8NAV1 312 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 SLF1Q9BQI6 1058 aa13.51□□□□□ -0.25
CHMP2A-207ENST00000600804 LLPHQ9BRT6 129 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms