RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RASGRP2Q7LDG7 609 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 DDX11Q96FC9 970 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 APBA2Q99767 749 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 TM6SF1Q9BZW5 370 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 RANBP17Q9H2T7 1088 aaKnown RBP15.14■□□□□ 0.01
SRRM1-223ENST00000600523 ACAD9Q9H845 621 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 GABRQQ9UN88 632 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 A0A0G2JMZ2 1700 aa15.14■□□□□ 0.01
SRRM1-223ENST00000600523 PALM3A6NDB9 673 aaPredicted RBP15.13■□□□□ 0.01
SRRM1-223ENST00000600523 MGAMO43451 1857 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 ALAS1P13196 640 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 EXOSC10Q01780 885 aaKnown RBP15.13■□□□□ 0.01
SRRM1-223ENST00000600523 TROAPQ12815 778 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 GRB14Q14449 540 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 MORN1Q5T089 497 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 RUFY3Q7L099 469 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 SGMS1Q86VZ5 419 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 ANKRD35Q8N283 1001 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 UBA5Q9GZZ9 404 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 VAT1LQ9HCJ6 419 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 HOMER2Q9NSB8 354 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 RBM28Q9NW13 759 aaKnown RBP15.13■□□□□ 0.01
SRRM1-223ENST00000600523 GJD2Q9UKL4 321 aa15.13■□□□□ 0.01
SRRM1-223ENST00000600523 RLFQ13129 1914 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 CCDC196A0A1B0GTZ2 297 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 ZBTB43O43298 467 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 ADORA2AP29274 412 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 CAP1Q01518 475 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 MICU3Q86XE3 530 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 ADGRF4Q8IZF3 695 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 ZSWIM6Q9HCJ5 1215 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 RNF146Q9NTX7 359 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 SEC63Q9UGP8 760 aaKnown RBP15.12■□□□□ 0.01
SRRM1-223ENST00000600523 MAD2L2Q9UI95 211 aa15.12■□□□□ 0.01
SRRM1-223ENST00000600523 PARP14Q460N5 1801 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 KLF18A0A0U1RQI7 1052 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 CCDC85CA6NKD9 419 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 HMGCRP04035 888 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 RCAN1P53805 252 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 SNAP25P60880 206 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 CDC37Q16543 378 aaPredicted RBP15.11■□□□□ 0.01
SRRM1-223ENST00000600523 MFSD14CQ5VZR4 134 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 Q6ZUG5 572 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 FANCBQ8NB91 859 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 ARMC5Q96C12 935 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 AGBL1Q96MI9 1066 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 TMEM106CQ9BVX2 250 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 SENP2Q9HC62 589 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 PFASO15067 1338 aa15.11■□□□□ 0.01
SRRM1-223ENST00000600523 HOXC6P09630 235 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 SMARCA1P28370 1054 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 RTN1Q16799 776 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 APOA5Q6Q788 366 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 FBXO11Q86XK2 927 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 HOMER1Q86YM7 354 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 FBXL16Q8N461 479 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 SH3TC2Q8TF17 1288 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 BRF1Q92994 677 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 RRP36Q96EU6 259 aaKnown RBP15.1■□□□□ 0.01
SRRM1-223ENST00000600523 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
SRRM1-223ENST00000600523 MYL10Q9BUA6 226 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 AMNQ9BXJ7 453 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 GPHNQ9NQX3 736 aaPredicted RBP15.1■□□□□ 0.01
SRRM1-223ENST00000600523 RIPK3Q9Y572 518 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 ABCB11O95342 1321 aa15.1■□□□□ 0.01
SRRM1-223ENST00000600523 ZSWIM8A7E2V4 1837 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 COL11A1P12107 1806 aaPredicted RBP15.09■□□□□ 0.01
SRRM1-223ENST00000600523 GOLGA8AA7E2F4 631 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 GOLGA8BA8MQT2 603 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 ZBTB5O15062 677 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 CPA1P15085 419 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 ELNP15502 786 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 ANKRD1Q15327 319 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 USH1GQ495M9 461 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 C8orf34Q49A92 452 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 MCF2L2Q86YR7 1114 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 CCDC144CPQ8IYA2 1237 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 USP6NLQ92738 828 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 MAF1Q9H063 256 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 CPVLQ9H3G5 476 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 JMJD4Q9H9V9 463 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 PDRG1Q9NUG6 133 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 DIS3Q9Y2L1 958 aaKnown RBP15.09■□□□□ 0.01
SRRM1-223ENST00000600523 MRPL11Q9Y3B7 192 aaKnown RBP15.09■□□□□ 0.01
SRRM1-223ENST00000600523 ZNF536O15090 1300 aa15.09■□□□□ 0.01
SRRM1-223ENST00000600523 PNMA6FA0A0J9YX94 578 aa15.08■□□□□ 0
SRRM1-223ENST00000600523 POTEB2H3BUK9 544 aa15.08■□□□□ 0
SRRM1-223ENST00000600523 INHAP05111 366 aa15.08■□□□□ 0
SRRM1-223ENST00000600523 METAP2P50579 478 aaKnown RBP eCLIP15.08■□□□□ 0
SRRM1-223ENST00000600523 QRICH1Q2TAL8 776 aa15.08■□□□□ 0
SRRM1-223ENST00000600523 NSMFQ6X4W1 530 aa15.08■□□□□ 0
SRRM1-223ENST00000600523 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.08■□□□□ 0
SRRM1-223ENST00000600523 ZNF333Q96JL9 665 aa15.08■□□□□ 0
SRRM1-223ENST00000600523 SPZ1Q9BXG8 430 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms