RNA–Protein interactions for RNA: ENST00000600479.5

PLD3-222, Transcript of phospholipase D family member 3, human

TSL 4

Gene PLD3, Length 477 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-222	ENST00000600479	CPVL	Q9H3G5	476 aa		18.83	■□□□□ 0.6
PLD3-222	ENST00000600479	RIOX1	Q9H6W3	641 aa		18.83	■□□□□ 0.6
PLD3-222	ENST00000600479	IVNS1ABP	Q9Y6Y0	642 aa		18.83	■□□□□ 0.6
PLD3-222	ENST00000600479	ECM2	O94769	699 aa	Predicted RBP	18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	APOBR	Q0VD83	1088 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	TOB2	Q14106	344 aa	Predicted RBP	18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	PPP2R5B	Q15173	497 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	TKFC	Q3LXA3	575 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	WDR78	Q5VTH9	848 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	CCDC174	Q6PII3	467 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	ABRA	Q8N0Z2	381 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	MTMR8	Q96EF0	704 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	SPZ1	Q9BXG8	430 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	JMJD4	Q9H9V9	463 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	RBM28	Q9NW13	759 aa	Known RBP	18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	FBXO40	Q9UH90	709 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	PTPN22	Q9Y2R2	807 aa		18.82	■□□□□ 0.6
PLD3-222	ENST00000600479	NID2	Q14112	1375 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	PARP14	Q460N5	1801 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	SLC15A5	A6NIM6	579 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	GOLGA8B	A8MQT2	603 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	DHX16	O60231	1041 aa	Known RBP	18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	RXRA	P19793	462 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	PTPRE	P23469	700 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	SNAP25	P60880	206 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	PRKCZ	Q05513	592 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	ANKRD1	Q15327	319 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	CDC37	Q16543	378 aa	Predicted RBP	18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	MORN1	Q5T089	497 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	CHST13	Q8NET6	341 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	AGBL1	Q96MI9	1066 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	GJD2	Q9UKL4	321 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	CCPG1	Q9ULG6	757 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	RIPK3	Q9Y572	518 aa		18.81	■□□□□ 0.6
PLD3-222	ENST00000600479	GOLGA8A	A7E2F4	631 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	FLT3LG	P49771	235 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	METAP2	P50579	478 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	IRF5	Q13568	498 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	GRB14	Q14449	540 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	RTN1	Q16799	776 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	SLC35G1	Q2M3R5	365 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	TMTC3	Q6ZXV5	915 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	NBPF11	Q86T75	865 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	CCDC144CP	Q8IYA2	1237 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	KIF2C	Q99661	725 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	NUDT12	Q9BQG2	462 aa		18.8	■□□□□ 0.6
PLD3-222	ENST00000600479	CCDC196	A0A1B0GTZ2	297 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	ZBTB5	O15062	677 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	CYTH3	O43739	400 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	PLEKHA8P1	O95397	391 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	FCER1A	P12319	257 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	NEK4	P51957	841 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	TRAF1	Q13077	416 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	QRICH1	Q2TAL8	776 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	RAB11FIP4	Q86YS3	637 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	IL27	Q8NEV9	243 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	USP6NL	Q92738	828 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	ZNF274	Q96GC6	653 aa	Predicted RBP	18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	TBC1D32	Q96NH3	1257 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	VAT1L	Q9HCJ6	419 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	GABRQ	Q9UN88	632 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	HPS5	Q9UPZ3	1129 aa		18.79	■□□□□ 0.6
PLD3-222	ENST00000600479	XRCC5	P13010	732 aa	Known RBP	18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	ALAS1	P13196	640 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	PDIA3	P30101	505 aa	Known RBP	18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	RGS2	P41220	211 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	SLC4A3	P48751	1232 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	MAP2K5	Q13163	448 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	KCTD2	Q14681	263 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	SRBD1	Q8N5C6	995 aa	Known RBP	18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	RAET1E	Q8TD07	263 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	TRERF1	Q96PN7	1200 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	MMP19	Q99542	508 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	MCOLN1	Q9GZU1	580 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	ACAD9	Q9H845	621 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	RNF146	Q9NTX7	359 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	PTCH2	Q9Y6C5	1203 aa		18.78	■□□□□ 0.6
PLD3-222	ENST00000600479	PNMA6F	A0A0J9YX94	578 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	HOXC6	P09630	235 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	ADORA2A	P29274	412 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	AK2	P54819	239 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	FBXO11	Q86XK2	927 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	RRP36	Q96EU6	259 aa	Known RBP	18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	PIGS	Q96S52	555 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	AMN	Q9BXJ7	453 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	MAF1	Q9H063	256 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	HOMER2	Q9NSB8	354 aa		18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.77	■□□□□ 0.6
PLD3-222	ENST00000600479	CASP8AP2	Q9UKL3	1982 aa		18.77	■□□□□ 0.59
PLD3-222	ENST00000600479	ABCB11	O95342	1321 aa		18.76	■□□□□ 0.59
PLD3-222	ENST00000600479	CDC27	P30260	824 aa		18.76	■□□□□ 0.59
PLD3-222	ENST00000600479	RABEP1	Q15276	862 aa		18.76	■□□□□ 0.59
PLD3-222	ENST00000600479	HOMER1	Q86YM7	354 aa		18.76	■□□□□ 0.59
PLD3-222	ENST00000600479	TRMT44	Q8IYL2	757 aa	Known RBP	18.76	■□□□□ 0.59
PLD3-222	ENST00000600479	PXYLP1	Q8TE99	480 aa		18.76	■□□□□ 0.59
PLD3-222	ENST00000600479	APBA2	Q99767	749 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms