RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 RAD50Q92878 1312 aa18.4■□□□□ 0.54
IRF3-226ENST00000600453 SMCHD1A6NHR9 2005 aa18.4■□□□□ 0.54
IRF3-226ENST00000600453 AKR1A1P14550 325 aa18.39■□□□□ 0.53
IRF3-226ENST00000600453 RNF180Q86T96 592 aa18.39■□□□□ 0.53
IRF3-226ENST00000600453 TBC1D10CQ8IV04 446 aa18.39■□□□□ 0.53
IRF3-226ENST00000600453 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
IRF3-226ENST00000600453 HOMER2Q9NSB8 354 aa18.39■□□□□ 0.53
IRF3-226ENST00000600453 FAM184BQ9ULE4 1060 aa18.39■□□□□ 0.53
IRF3-226ENST00000600453 A0A1W2PPC1 479 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 ICAM1P05362 532 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 ALAS1P13196 640 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 GPATCH4Q5T3I0 446 aaKnown RBP18.38■□□□□ 0.53
IRF3-226ENST00000600453 GJC2Q5T442 439 aaPredicted RBP18.38■□□□□ 0.53
IRF3-226ENST00000600453 SYDE2Q5VT97 1194 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 AGBL1Q96MI9 1066 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 RNF146Q9NTX7 359 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 ZNF536O15090 1300 aa18.38■□□□□ 0.53
IRF3-226ENST00000600453 ASB14A6NK59 587 aa18.37■□□□□ 0.53
IRF3-226ENST00000600453 KDM4AO75164 1064 aa18.37■□□□□ 0.53
IRF3-226ENST00000600453 ZNF865P0CJ78 1059 aaPredicted RBP18.37■□□□□ 0.53
IRF3-226ENST00000600453 PDHBP11177 359 aa18.37■□□□□ 0.53
IRF3-226ENST00000600453 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
IRF3-226ENST00000600453 CCDC174Q6PII3 467 aa18.37■□□□□ 0.53
IRF3-226ENST00000600453 ANKS1AQ92625 1134 aa18.37■□□□□ 0.53
IRF3-226ENST00000600453 XPNPEP3Q9NQH7 507 aa18.37■□□□□ 0.53
IRF3-226ENST00000600453 CCPG1Q9ULG6 757 aa18.37■□□□□ 0.53
IRF3-226ENST00000600453 SNAI1O95863 264 aaPredicted RBP18.36■□□□□ 0.53
IRF3-226ENST00000600453 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
IRF3-226ENST00000600453 CHMLP26374 656 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 BMP8BP34820 402 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 TRDNQ13061 729 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 LRRC41Q15345 812 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 ZSCAN10Q96SZ4 725 aaPredicted RBP18.36■□□□□ 0.53
IRF3-226ENST00000600453 TRIOBPQ9H2D6 2365 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 RANBP17Q9H2T7 1088 aaKnown RBP18.36■□□□□ 0.53
IRF3-226ENST00000600453 KAT14Q9H8E8 782 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 GPCPD1Q9NPB8 672 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
IRF3-226ENST00000600453 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
IRF3-226ENST00000600453 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
IRF3-226ENST00000600453 FRMPD3Q5JV73 1810 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 NEDD4P46934 1319 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 SLC16A2P36021 539 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 ACVR2BQ13705 512 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 LRRC26Q2I0M4 334 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 TTBK2Q6IQ55 1244 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 FAM133AQ8N9E0 248 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 ZKSCAN3Q9BRR0 538 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 UBAC1Q9BSL1 405 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 PRO3102Q9H379 93 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 SPC25Q9HBM1 224 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 A1CFQ9NQ94 594 aaKnown RBP18.35■□□□□ 0.53
IRF3-226ENST00000600453 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.35■□□□□ 0.53
IRF3-226ENST00000600453 PRKAG2Q9UGJ0 569 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
IRF3-226ENST00000600453 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
IRF3-226ENST00000600453 B4E1Z4 1266 aa18.34■□□□□ 0.53
IRF3-226ENST00000600453 TAL1P17542 331 aaPredicted RBP18.34■□□□□ 0.53
IRF3-226ENST00000600453 SLC39A5Q6ZMH5 540 aa18.34■□□□□ 0.53
IRF3-226ENST00000600453 ARMCX2Q7L311 632 aa18.34■□□□□ 0.53
IRF3-226ENST00000600453 PNMA1Q8ND90 353 aa18.34■□□□□ 0.53
IRF3-226ENST00000600453 TSEN34Q9BSV6 310 aaKnown RBP18.34■□□□□ 0.53
IRF3-226ENST00000600453 ADD3Q9UEY8 706 aaKnown RBP18.34■□□□□ 0.53
IRF3-226ENST00000600453 ZHX1Q9UKY1 873 aaPredicted RBP18.34■□□□□ 0.53
IRF3-226ENST00000600453 ZMYND8Q9ULU4 1186 aaPredicted RBP18.34■□□□□ 0.53
IRF3-226ENST00000600453 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 DUSP11O75319 330 aaKnown RBP18.33■□□□□ 0.52
IRF3-226ENST00000600453 ADCYAP1R1P41586 468 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 ATN1P54259 1190 aaPredicted RBP18.33■□□□□ 0.52
IRF3-226ENST00000600453 SNAP25P60880 206 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.52
IRF3-226ENST00000600453 C1orf53Q5VUE5 145 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 GDF15Q99988 308 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 MAF1Q9H063 256 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 PHF24Q9UPV7 400 aa18.33■□□□□ 0.52
IRF3-226ENST00000600453 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
IRF3-226ENST00000600453 CNTN2Q02246 1040 aa18.32■□□□□ 0.52
IRF3-226ENST00000600453 NSMFQ6X4W1 530 aa18.32■□□□□ 0.52
IRF3-226ENST00000600453 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
IRF3-226ENST00000600453 MPHOSPH6Q99547 160 aaKnown RBP18.32■□□□□ 0.52
IRF3-226ENST00000600453 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
IRF3-226ENST00000600453 WDR19Q8NEZ3 1342 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 LAMA4Q16363 1823 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 MOXD2PA6NHM9 499 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 B4DLN1 442 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 SGSM2O43147 1006 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 PGK1P00558 417 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 SYN1P17600 705 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 MRPL12P52815 198 aaKnown RBP18.31■□□□□ 0.52
IRF3-226ENST00000600453 RTP1P59025 263 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 CCDC144BQ3MJ40 725 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 ASPRV1Q53RT3 343 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
IRF3-226ENST00000600453 IFIT1BQ5T764 474 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms