RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 LEXMQ3ZCV2 418 aa21.38■■□□□ 1.01
SSBP4-207ENST00000600244 TNNI3KQ59H18 835 aa21.38■■□□□ 1.01
SSBP4-207ENST00000600244 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.38■■□□□ 1.01
SSBP4-207ENST00000600244 SLC9A7Q96T83 725 aa21.38■■□□□ 1.01
SSBP4-207ENST00000600244 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
SSBP4-207ENST00000600244 RIPK3Q9Y572 518 aa21.38■■□□□ 1.01
SSBP4-207ENST00000600244 FPGT-TNNI3KV9GXZ4 949 aa21.38■■□□□ 1.01
SSBP4-207ENST00000600244 GNAI3P08754 354 aa21.37■■□□□ 1.01
SSBP4-207ENST00000600244 ICA1Q05084 483 aa21.37■■□□□ 1.01
SSBP4-207ENST00000600244 SPRED2Q7Z698 418 aa21.37■■□□□ 1.01
SSBP4-207ENST00000600244 UBE2ZQ9H832 354 aaPredicted RBP21.37■■□□□ 1.01
SSBP4-207ENST00000600244 NOB1Q9ULX3 412 aaKnown RBP21.37■■□□□ 1.01
SSBP4-207ENST00000600244 AKR1B1P15121 316 aa21.36■■□□□ 1.01
SSBP4-207ENST00000600244 HERC6Q8IVU3 1022 aa21.36■■□□□ 1.01
SSBP4-207ENST00000600244 TEX13BQ9BXU2 312 aa21.36■■□□□ 1.01
SSBP4-207ENST00000600244 MCM3APO60318 1980 aa21.36■■□□□ 1.01
SSBP4-207ENST00000600244 PNMA6EA0A0J9YXQ4 647 aa21.35■■□□□ 1.01
SSBP4-207ENST00000600244 SSTR3P32745 418 aaPredicted RBP21.35■■□□□ 1.01
SSBP4-207ENST00000600244 TMED8Q6PL24 325 aaPredicted RBP21.35■■□□□ 1.01
SSBP4-207ENST00000600244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.35■■□□□ 1.01
SSBP4-207ENST00000600244 PHOX2BQ99453 314 aa21.35■■□□□ 1.01
SSBP4-207ENST00000600244 API5Q9BZZ5 524 aaKnown RBP21.35■■□□□ 1.01
SSBP4-207ENST00000600244 MCM9Q9NXL9 1143 aa21.35■■□□□ 1.01
SSBP4-207ENST00000600244 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.34■■□□□ 1.01
SSBP4-207ENST00000600244 DCXO43602 365 aa21.34■■□□□ 1.01
SSBP4-207ENST00000600244 IL9P15248 144 aa21.34■■□□□ 1.01
SSBP4-207ENST00000600244 ARMCX2Q7L311 632 aa21.34■■□□□ 1.01
SSBP4-207ENST00000600244 DEFB128Q7Z7B8 93 aa21.34■■□□□ 1.01
SSBP4-207ENST00000600244 SWAP70Q9UH65 585 aa21.34■■□□□ 1.01
SSBP4-207ENST00000600244 GNEQ9Y223 722 aaKnown RBP21.34■■□□□ 1.01
SSBP4-207ENST00000600244 CACNA1AO00555 2505 aa21.34■■□□□ 1.01
SSBP4-207ENST00000600244 KIF28PB7ZC32 967 aa21.33■■□□□ 1.01
SSBP4-207ENST00000600244 TNFAIP2Q03169 654 aa21.33■■□□□ 1.01
SSBP4-207ENST00000600244 SNRNP48Q6IEG0 339 aaKnown RBP21.33■■□□□ 1.01
SSBP4-207ENST00000600244 ANKS1AQ92625 1134 aa21.33■■□□□ 1.01
SSBP4-207ENST00000600244 ST18O60284 1047 aa21.32■■□□□ 1
SSBP4-207ENST00000600244 CYP2D6P10635 497 aa21.32■■□□□ 1
SSBP4-207ENST00000600244 ACTN1P12814 892 aa21.32■■□□□ 1
SSBP4-207ENST00000600244 EEF2P13639 858 aaKnown RBP21.32■■□□□ 1
SSBP4-207ENST00000600244 FSCN1Q16658 493 aaKnown RBP21.32■■□□□ 1
SSBP4-207ENST00000600244 CCDC144CPQ8IYA2 1237 aa21.32■■□□□ 1
SSBP4-207ENST00000600244 DYNLL2Q96FJ2 89 aa21.32■■□□□ 1
SSBP4-207ENST00000600244 ALDH8A1Q9H2A2 487 aaPredicted RBP21.32■■□□□ 1
SSBP4-207ENST00000600244 COL4A4P53420 1690 aaPredicted RBP21.31■■□□□ 1
SSBP4-207ENST00000600244 GRXCR2A6NFK2 248 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 E9PSI1 815 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 ATP2A1O14983 1001 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 PSMC6P62333 389 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 FAM83BQ5T0W9 1011 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 CCDC17Q96LX7 622 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 DBNLQ9UJU6 430 aaKnown RBP21.31■■□□□ 1
SSBP4-207ENST00000600244 SCN5AQ14524 2016 aa21.31■■□□□ 1
SSBP4-207ENST00000600244 CYP2C9P11712 490 aa21.3■■□□□ 1
SSBP4-207ENST00000600244 KCNA5P22460 613 aa21.3■■□□□ 1
SSBP4-207ENST00000600244 PTCRAQ6ISU1 281 aaPredicted RBP21.3■■□□□ 1
SSBP4-207ENST00000600244 HFE2Q6ZVN8 426 aa21.3■■□□□ 1
SSBP4-207ENST00000600244 TLK2Q86UE8 772 aa21.3■■□□□ 1
SSBP4-207ENST00000600244 GDPD5Q8WTR4 605 aa21.3■■□□□ 1
SSBP4-207ENST00000600244 DCP1AQ9NPI6 582 aaPredicted RBP21.3■■□□□ 1
SSBP4-207ENST00000600244 NAV1Q8NEY1 1877 aa21.3■■□□□ 1
SSBP4-207ENST00000600244 MAGEB6P1A0A0J9YX57 407 aa21.29■■□□□ 1
SSBP4-207ENST00000600244 PTGS1P23219 599 aa21.29■■□□□ 1
SSBP4-207ENST00000600244 RFC2P35250 354 aa21.29■■□□□ 1
SSBP4-207ENST00000600244 NOL8Q76FK4 1167 aaKnown RBP21.29■■□□□ 1
SSBP4-207ENST00000600244 CRNKL1Q9BZJ0 848 aaKnown RBP21.29■■□□□ 1
SSBP4-207ENST00000600244 SUGCTQ9HAC7 445 aa21.29■■□□□ 1
SSBP4-207ENST00000600244 LCHNA4D1U4 455 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 DYNC1LI2O43237 492 aaPredicted RBP21.28■■□□□ 1
SSBP4-207ENST00000600244 ZEB2O60315 1214 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 SUPT20HL2P0C7V6 817 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 FOXK2Q01167 660 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 SLFN5Q08AF3 891 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 SLF1Q9BQI6 1058 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 AP5M1Q9H0R1 490 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 GOPCQ9HD26 462 aa21.28■■□□□ 1
SSBP4-207ENST00000600244 TRMT13Q9NUP7 481 aaKnown RBP21.28■■□□□ 1
SSBP4-207ENST00000600244 TLR7Q9NYK1 1049 aaKnown RBP21.28■■□□□ 1
SSBP4-207ENST00000600244 GNAI2P04899 355 aa21.27■■□□□ 1
SSBP4-207ENST00000600244 SMPD1P17405 629 aa21.27■■□□□ 1
SSBP4-207ENST00000600244 HNRNPUQ00839 825 aaKnown RBP eCLIP21.27■■□□□ 1
SSBP4-207ENST00000600244 PUS10Q3MIT2 529 aaKnown RBP21.27■■□□□ 1
SSBP4-207ENST00000600244 ANKRD35Q8N283 1001 aa21.27■■□□□ 1
SSBP4-207ENST00000600244 SDR42E1Q8WUS8 393 aa21.27■■□□□ 1
SSBP4-207ENST00000600244 KANSL2Q9H9L4 492 aa21.27■■□□□ 1
SSBP4-207ENST00000600244 ZNF536O15090 1300 aa21.27■□□□□ 0.99
SSBP4-207ENST00000600244 USP34Q70CQ2 3546 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 ZDBF2Q9HCK1 2354 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 CNTN2Q02246 1040 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 CPXCR1Q8N123 301 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 NEK9Q8TD19 979 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 MFSD14AQ96MC6 490 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 Q9Y3F1 56 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 TNKSO95271 1327 aa21.26■□□□□ 0.99
SSBP4-207ENST00000600244 TET1Q8NFU7 2136 aa21.25■□□□□ 0.99
SSBP4-207ENST00000600244 C19orf67A6NJJ6 358 aa21.25■□□□□ 0.99
SSBP4-207ENST00000600244 IQCF3P0C7M6 154 aa21.25■□□□□ 0.99
SSBP4-207ENST00000600244 CDK8P49336 464 aa21.25■□□□□ 0.99
SSBP4-207ENST00000600244 POLA2Q14181 598 aa21.25■□□□□ 0.99
SSBP4-207ENST00000600244 FAM133AQ8N9E0 248 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms