RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 SMCO2A6NFE2 343 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 M0R2N6 131 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 STK38Q15208 465 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 RILPL1Q5EBL4 403 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 SYDE2Q5VT97 1194 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 FAM177A1Q8N128 213 aaPredicted RBP17.36■□□□□ 0.37
VRK3-218ENST00000600031 DAGLBQ8NCG7 672 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 RASGRP4Q8TDF6 673 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 PTPRAP18433 802 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 SNAP25P60880 206 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 CDC37Q16543 378 aaPredicted RBP17.36■□□□□ 0.37
VRK3-218ENST00000600031 QRICH1Q2TAL8 776 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 GALNT17Q6IS24 598 aa17.36■□□□□ 0.37
VRK3-218ENST00000600031 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
VRK3-218ENST00000600031 WDR90Q96KV7 1748 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 hCG_1984214I3L0E3 225 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 DGKZQ13574 1117 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 PTPAQ15257 358 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 ZNF713Q8N859 430 aaPredicted RBP17.35■□□□□ 0.37
VRK3-218ENST00000600031 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.35■□□□□ 0.37
VRK3-218ENST00000600031 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 PICK1Q9NRD5 415 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 PRR12Q9ULL5 1215 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 R3HCC1Q9Y3T6 440 aaKnown RBP17.35■□□□□ 0.37
VRK3-218ENST00000600031 PCDHB6Q9Y5E3 794 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 SPTLC2O15270 562 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 ATP2B1P20020 1258 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 STAT2P52630 851 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 SLC39A14Q15043 492 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 GLIPR1L2Q4G1C9 344 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 PIK3AP1Q6ZUJ8 805 aa17.35■□□□□ 0.37
VRK3-218ENST00000600031 GOLGA6L4A6NEF3 574 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 WNT7AO00755 349 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 ME1P48163 572 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 SPP2Q13103 211 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 KCNG4Q8TDN1 519 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 C6orf50Q9HD87 102 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
VRK3-218ENST00000600031 ESYT2A0FGR8 921 aa17.33■□□□□ 0.37
VRK3-218ENST00000600031 GNA11P29992 359 aa17.33■□□□□ 0.37
VRK3-218ENST00000600031 MTMR2Q13614 643 aa17.33■□□□□ 0.37
VRK3-218ENST00000600031 NOL9Q5SY16 702 aaKnown RBP17.33■□□□□ 0.37
VRK3-218ENST00000600031 CDCA5Q96FF9 252 aa17.33■□□□□ 0.37
VRK3-218ENST00000600031 POTEIP0CG38 1075 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 POTEJP0CG39 1038 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 LIG1P18858 919 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.36
VRK3-218ENST00000600031 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.33■□□□□ 0.36
VRK3-218ENST00000600031 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.36
VRK3-218ENST00000600031 ZNF280CQ8ND82 737 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 FUCA2Q9BTY2 467 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 EMILIN3Q9NT22 766 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 ZHX2Q9Y6X8 837 aa17.33■□□□□ 0.36
VRK3-218ENST00000600031 PPP1R18Q6NYC8 613 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 CHURC1Q8WUH1 139 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 LPAR1Q92633 364 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 KIFC2Q96AC6 838 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
VRK3-218ENST00000600031 PHIPQ8WWQ0 1821 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 PPP1R12BO60237 982 aaPredicted RBP17.32■□□□□ 0.36
VRK3-218ENST00000600031 PLA2G6O60733 806 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 MAP3K9P80192 1104 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 VGLL4Q14135 290 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 AS3MTQ9HBK9 375 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 FEM1BQ9UK73 627 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 PCDHA1Q9Y5I3 950 aa17.32■□□□□ 0.36
VRK3-218ENST00000600031 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
VRK3-218ENST00000600031 WDR46O15213 610 aaKnown RBP17.31■□□□□ 0.36
VRK3-218ENST00000600031 ADCY7P51828 1080 aa17.31■□□□□ 0.36
VRK3-218ENST00000600031 BACE1P56817 501 aa17.31■□□□□ 0.36
VRK3-218ENST00000600031 FAM160B2Q86V87 743 aa17.31■□□□□ 0.36
VRK3-218ENST00000600031 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
VRK3-218ENST00000600031 BIN2Q9UBW5 565 aaPredicted RBP17.31■□□□□ 0.36
VRK3-218ENST00000600031 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
VRK3-218ENST00000600031 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 PPP6R2O75170 966 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 ADCY5O95622 1261 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 TAL1P17542 331 aaPredicted RBP17.3■□□□□ 0.36
VRK3-218ENST00000600031 TTC38Q5R3I4 469 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 ADALQ6DHV7 355 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 PDCL3Q9H2J4 239 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 RIC8AQ9NPQ8 531 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 TMEM260Q9NX78 707 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 PAPPA2Q9BXP8 1791 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 VCAM1P19320 739 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 USP14P54578 494 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 ZNF174Q15697 407 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 AXDND1Q5T1B0 1012 aaPredicted RBP17.3■□□□□ 0.36
VRK3-218ENST00000600031 JAKMIP3Q5VZ66 844 aa17.3■□□□□ 0.36
VRK3-218ENST00000600031 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
VRK3-218ENST00000600031 MOB2Q70IA6 237 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms