RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 DTHD1Q6ZMT9 781 aa16.42■□□□□ 0.22
VRK3-217ENST00000599538 TRIML1Q8N9V2 468 aa16.42■□□□□ 0.22
VRK3-217ENST00000599538 IQUBQ8NA54 791 aa16.42■□□□□ 0.22
VRK3-217ENST00000599538 TBCKQ8TEA7 893 aa16.42■□□□□ 0.22
VRK3-217ENST00000599538 CCDC12Q8WUD4 166 aaPredicted RBP16.42■□□□□ 0.22
VRK3-217ENST00000599538 PLIN2Q99541 437 aa16.42■□□□□ 0.22
VRK3-217ENST00000599538 DHX36Q9H2U1 1008 aaKnown RBP16.42■□□□□ 0.22
VRK3-217ENST00000599538 C10orf71Q711Q0 1435 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 USP17L10C9JJH3 530 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 RAD17O75943 681 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 UBASH3AP57075 661 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 CCZ1BP86790 482 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
VRK3-217ENST00000599538 SEPT2Q15019 361 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 NAALADL2Q58DX5 795 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 KRT25Q7Z3Z0 450 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 ZNF277Q9NRM2 450 aaPredicted RBP16.41■□□□□ 0.22
VRK3-217ENST00000599538 SAMSN1Q9NSI8 373 aaKnown RBP16.41■□□□□ 0.22
VRK3-217ENST00000599538 INTS13Q9NVM9 706 aa16.41■□□□□ 0.22
VRK3-217ENST00000599538 COBLO75128 1261 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 SERPINC1P01008 464 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 DPEP1P16444 411 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
VRK3-217ENST00000599538 KLHL10Q6JEL2 608 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 REXO1Q8N1G1 1221 aaKnown RBP16.4■□□□□ 0.22
VRK3-217ENST00000599538 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 CCDC17Q96LX7 622 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 ESYT2A0FGR8 921 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 STX17P56962 302 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 CC2D2BQ6DHV5 1058 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 ARMCX5Q6P1M9 558 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 NEK8Q86SG6 692 aa16.4■□□□□ 0.22
VRK3-217ENST00000599538 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
VRK3-217ENST00000599538 ENOX1Q8TC92 643 aaKnown RBP16.4■□□□□ 0.22
VRK3-217ENST00000599538 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
VRK3-217ENST00000599538 UTRNP46939 3433 aa16.39■□□□□ 0.22
VRK3-217ENST00000599538 ZNF18P17022 549 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 UBE2SQ16763 222 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 GSDMAQ96QA5 445 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 DISC1Q9NRI5 854 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 PNMA6FA0A0J9YX94 578 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 PPP1R3GB7ZBB8 358 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 PSMD14O00487 310 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 SKILP12757 684 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
VRK3-217ENST00000599538 CLRN2A0PK11 232 aa16.38■□□□□ 0.21
VRK3-217ENST00000599538 USP27XA6NNY8 438 aa16.38■□□□□ 0.21
VRK3-217ENST00000599538 OR52Z1P0C646 297 aa16.38■□□□□ 0.21
VRK3-217ENST00000599538 STAT6P42226 847 aa16.38■□□□□ 0.21
VRK3-217ENST00000599538 ADCY7P51828 1080 aa16.38■□□□□ 0.21
VRK3-217ENST00000599538 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
VRK3-217ENST00000599538 TCP10L2B9ZVM9 353 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 NEMFO60524 1076 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
VRK3-217ENST00000599538 TDP2O95551 362 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 GOLGA8FQ08AF8 430 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 GOLGA8DPQ0D2H9 430 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
VRK3-217ENST00000599538 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 CCDC34Q96HJ3 373 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
VRK3-217ENST00000599538 IMPACTQ9P2X3 320 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 DACH1Q9UI36 760 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 GTPBP6O43824 516 aaPredicted RBP16.37■□□□□ 0.21
VRK3-217ENST00000599538 SLC37A4O43826 429 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 ERCC5P28715 1186 aaPredicted RBP16.37■□□□□ 0.21
VRK3-217ENST00000599538 PRPHP41219 470 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 TECP42680 631 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 BAG6P46379 1132 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
VRK3-217ENST00000599538 LARGE2Q8N3Y3 721 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 MKL1Q969V6 931 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 KANSL2Q9H9L4 492 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 NYAP2Q9P242 653 aa16.37■□□□□ 0.21
VRK3-217ENST00000599538 ATRNL1Q5VV63 1379 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 hCG_1984214I3L0E3 225 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 ZBTB5O15062 677 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 TXLNAP40222 546 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 UBA7P41226 1012 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 SLC1A4P43007 532 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 SNAP25P60880 206 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 ICA1Q05084 483 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 RRAGBQ5VZM2 374 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 SLFN13Q68D06 897 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 CDAN1Q8IWY9 1227 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 ZNF713Q8N859 430 aaPredicted RBP16.36■□□□□ 0.21
VRK3-217ENST00000599538 CSRNP1Q96S65 589 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 GMLQ99445 158 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 CCSER1Q9C0I3 900 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 PSME4Q14997 1843 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 LAD1O00515 517 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 ENTPD3O75355 529 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 GH2P01242 217 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
VRK3-217ENST00000599538 GSDMDP57764 484 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms