RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 PALM3A6NDB9 673 aaPredicted RBP21.2■□□□□ 0.98
LIG1-216ENST00000598938 ECM2O94769 699 aaPredicted RBP21.2■□□□□ 0.98
LIG1-216ENST00000598938 FDX1P10109 184 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 SLC16A2P36021 539 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 IRF5Q13568 498 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 TMEM132BQ14DG7 1078 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 Q3C1V9 767 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 SYDE2Q5VT97 1194 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 STAG2Q8N3U4 1231 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 MYL10Q9BUA6 226 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 SLC38A10Q9HBR0 1119 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 BRPF3Q9ULD4 1205 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 PRR12Q9ULL5 1215 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 SLC12A7Q9Y666 1083 aa21.2■□□□□ 0.98
LIG1-216ENST00000598938 CALM1P0DP23 149 aa21.19■□□□□ 0.98
LIG1-216ENST00000598938 CALM2P0DP24 149 aa21.19■□□□□ 0.98
LIG1-216ENST00000598938 CALM3P0DP25 149 aa21.19■□□□□ 0.98
LIG1-216ENST00000598938 FGD1P98174 961 aa21.19■□□□□ 0.98
LIG1-216ENST00000598938 APOA5Q6Q788 366 aa21.19■□□□□ 0.98
LIG1-216ENST00000598938 BRF1Q92994 677 aa21.19■□□□□ 0.98
LIG1-216ENST00000598938 KIF2CQ99661 725 aa21.19■□□□□ 0.98
LIG1-216ENST00000598938 ZNF214Q9UL59 606 aaPredicted RBP21.19■□□□□ 0.98
LIG1-216ENST00000598938 ADCY3O60266 1144 aa21.18■□□□□ 0.98
LIG1-216ENST00000598938 ZBED4O75132 1171 aa21.18■□□□□ 0.98
LIG1-216ENST00000598938 TOB2Q14106 344 aaPredicted RBP21.18■□□□□ 0.98
LIG1-216ENST00000598938 NUP133Q8WUM0 1156 aa21.18■□□□□ 0.98
LIG1-216ENST00000598938 SPATC1LQ9H0A9 340 aa21.18■□□□□ 0.98
LIG1-216ENST00000598938 UNC93B1Q9H1C4 597 aa21.18■□□□□ 0.98
LIG1-216ENST00000598938 ALDH8A1Q9H2A2 487 aaPredicted RBP21.18■□□□□ 0.98
LIG1-216ENST00000598938 PDRG1Q9NUG6 133 aa21.18■□□□□ 0.98
LIG1-216ENST00000598938 COL11A1P12107 1806 aaPredicted RBP21.18■□□□□ 0.98
LIG1-216ENST00000598938 ALPK3Q96L96 1907 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 KLF18A0A0U1RQI7 1052 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 KLRF2D3W0D1 207 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 ATP2A1O14983 1001 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 RCAN1P53805 252 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 EVCP57679 992 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 CCNA1P78396 465 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 APOBRQ0VD83 1088 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 SYNE3Q6ZMZ3 975 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 CTCFLQ8NI51 663 aaPredicted RBP21.17■□□□□ 0.98
LIG1-216ENST00000598938 TBC1D32Q96NH3 1257 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 UBA5Q9GZZ9 404 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 RANBP17Q9H2T7 1088 aaKnown RBP21.17■□□□□ 0.98
LIG1-216ENST00000598938 CPVLQ9H3G5 476 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 GABRQQ9UN88 632 aa21.17■□□□□ 0.98
LIG1-216ENST00000598938 ZBTB43O43298 467 aa21.16■□□□□ 0.98
LIG1-216ENST00000598938 EVI5O60447 810 aa21.16■□□□□ 0.98
LIG1-216ENST00000598938 KIF5BP33176 963 aa21.16■□□□□ 0.98
LIG1-216ENST00000598938 FLT3LGP49771 235 aa21.16■□□□□ 0.98
LIG1-216ENST00000598938 OAZ1P54368 228 aa21.16■□□□□ 0.98
LIG1-216ENST00000598938 MICU3Q86XE3 530 aa21.16■□□□□ 0.98
LIG1-216ENST00000598938 MOV10L1Q9BXT6 1211 aaKnown RBP21.16■□□□□ 0.98
LIG1-216ENST00000598938 PORCNQ9H237 461 aa21.16■□□□□ 0.98
LIG1-216ENST00000598938 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
LIG1-216ENST00000598938 NID2Q14112 1375 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 ZNF536O15090 1300 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 TNPO2O14787 897 aaKnown RBP21.15■□□□□ 0.98
LIG1-216ENST00000598938 INHAP05111 366 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 RXRAP19793 462 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 MAPK4P31152 587 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 STAT3P40763 770 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 SNAP25P60880 206 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 PLS1Q14651 629 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 SLC35G1Q2M3R5 365 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 RAB11FIP4Q86YS3 637 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 RIOX2Q8IUF8 465 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 ADGRF4Q8IZF3 695 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 FANCBQ8NB91 859 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 SHCBP1Q8NEM2 672 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 TEX13BQ9BXU2 312 aa21.15■□□□□ 0.98
LIG1-216ENST00000598938 PAK6Q9NQU5 681 aaPredicted RBP21.15■□□□□ 0.98
LIG1-216ENST00000598938 DOCK3Q8IZD9 2030 aa21.14■□□□□ 0.98
LIG1-216ENST00000598938 CCDC144CPQ8IYA2 1237 aa21.14■□□□□ 0.97
LIG1-216ENST00000598938 CRISPLD2Q9H0B8 497 aa21.14■□□□□ 0.97
LIG1-216ENST00000598938 RIOX1Q9H6W3 641 aa21.14■□□□□ 0.97
LIG1-216ENST00000598938 JMJD4Q9H9V9 463 aa21.14■□□□□ 0.97
LIG1-216ENST00000598938 RAVER2Q9HCJ3 691 aaKnown RBP21.14■□□□□ 0.97
LIG1-216ENST00000598938 GOLGA8AA7E2F4 631 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 GOLGA8BA8MQT2 603 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 SLC25A27O95847 323 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 COPB2P35606 906 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 GNAQP50148 359 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 NEK4P51957 841 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 SNRNP48Q6IEG0 339 aaKnown RBP21.13■□□□□ 0.97
LIG1-216ENST00000598938 CPXCR1Q8N123 301 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 MTMR8Q96EF0 704 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 LZTS2Q9BRK4 669 aa21.13■□□□□ 0.97
LIG1-216ENST00000598938 LAMA3Q16787 3333 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 CYTH3O43739 400 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 PLEKHA8P1O95397 391 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 ICAM1P05362 532 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 ERCC3P19447 782 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 SMARCA1P28370 1054 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 AK2P54819 239 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 RTN1Q16799 776 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 CCDC174Q6PII3 467 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 TMTC3Q6ZXV5 915 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 ANKLE1Q8NAG6 615 aa21.12■□□□□ 0.97
LIG1-216ENST00000598938 COA7Q96BR5 231 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms