RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 CST5P28325 142 aaPredicted RBP18.62■□□□□ 0.57
SMG9-208ENST00000598886 STAT2P52630 851 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 SHHQ15465 462 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 BADQ92934 168 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 EVI5LQ96CN4 794 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 TSEN34Q9BSV6 310 aaKnown RBP18.62■□□□□ 0.57
SMG9-208ENST00000598886 UPF3AQ9H1J1 476 aaKnown RBP18.62■□□□□ 0.57
SMG9-208ENST00000598886 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.62■□□□□ 0.57
SMG9-208ENST00000598886 FBXO40Q9UH90 709 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 STXBP5LQ9Y2K9 1186 aa18.62■□□□□ 0.57
SMG9-208ENST00000598886 ZMYM6O95789 1325 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 KIAA0355O15063 1070 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 SLC3A2P08195 630 aaKnown RBP18.61■□□□□ 0.57
SMG9-208ENST00000598886 FDX1P10109 184 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 ACLYP53396 1101 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 NKX3-2P78367 333 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 CNTN2Q02246 1040 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 ANKRD33Q7Z3H0 272 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 STAG1Q8WVM7 1258 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 FAM227BQ96M60 508 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 AGBL1Q96MI9 1066 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 GUCD1Q96NT3 240 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 A1CFQ9NQ94 594 aaKnown RBP18.61■□□□□ 0.57
SMG9-208ENST00000598886 PRDM5Q9NQX1 630 aaPredicted RBP18.61■□□□□ 0.57
SMG9-208ENST00000598886 FAM184BQ9ULE4 1060 aa18.61■□□□□ 0.57
SMG9-208ENST00000598886 SOWAHBA6NEL2 793 aa18.6■□□□□ 0.57
SMG9-208ENST00000598886 DUSP11O75319 330 aaKnown RBP18.6■□□□□ 0.57
SMG9-208ENST00000598886 EPHB4P54760 987 aa18.6■□□□□ 0.57
SMG9-208ENST00000598886 ACVR2BQ13705 512 aa18.6■□□□□ 0.57
SMG9-208ENST00000598886 ARMCX2Q7L311 632 aa18.6■□□□□ 0.57
SMG9-208ENST00000598886 FAM160B2Q86V87 743 aa18.6■□□□□ 0.57
SMG9-208ENST00000598886 HELLSQ9NRZ9 838 aa18.6■□□□□ 0.57
SMG9-208ENST00000598886 PRKAG2Q9UGJ0 569 aa18.6■□□□□ 0.57
SMG9-208ENST00000598886 CHD9Q3L8U1 2897 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 CLTBP09497 229 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 MCCP23508 829 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 SLC1A4P43007 532 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 CCDC144BQ3MJ40 725 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 RCSD1Q6JBY9 416 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 ZNF589Q86UQ0 364 aaPredicted RBP18.59■□□□□ 0.57
SMG9-208ENST00000598886 TICAM2Q86XR7 235 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 CCDC144CPQ8IYA2 1237 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 ANKRD35Q8N283 1001 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 ABHD16BQ9H3Z7 469 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 ACAD9Q9H845 621 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 ZHX1Q9UKY1 873 aaPredicted RBP18.59■□□□□ 0.57
SMG9-208ENST00000598886 PRR12Q9ULL5 1215 aa18.59■□□□□ 0.57
SMG9-208ENST00000598886 MOXD2PA6NHM9 499 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 TSPY2A6NKD2 308 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 SLC4A3P48751 1232 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 GJA9P57773 515 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 FAAP100Q0VG06 881 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 KCNA10Q16322 511 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 KCTD1Q719H9 257 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 SMC5Q8IY18 1101 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 CHURC1Q8WUH1 139 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 TOX2Q96NM4 488 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 HOMER2Q9NSB8 354 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 RNF146Q9NTX7 359 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 STX8Q9UNK0 236 aa18.58■□□□□ 0.56
SMG9-208ENST00000598886 FGAP02671 866 aa18.57■□□□□ 0.56
SMG9-208ENST00000598886 CDK7P50613 346 aa18.57■□□□□ 0.56
SMG9-208ENST00000598886 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
SMG9-208ENST00000598886 PPP4R3BQ5MIZ7 849 aa18.57■□□□□ 0.56
SMG9-208ENST00000598886 CHMP4CQ96CF2 233 aa18.57■□□□□ 0.56
SMG9-208ENST00000598886 TBX21Q9UL17 535 aa18.57■□□□□ 0.56
SMG9-208ENST00000598886 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
SMG9-208ENST00000598886 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.56■□□□□ 0.56
SMG9-208ENST00000598886 PQBP1O60828 265 aaKnown RBP18.56■□□□□ 0.56
SMG9-208ENST00000598886 HSPD1P10809 573 aaKnown RBP18.56■□□□□ 0.56
SMG9-208ENST00000598886 SNAP25P60880 206 aa18.56■□□□□ 0.56
SMG9-208ENST00000598886 NMIQ13287 307 aaPredicted RBP18.56■□□□□ 0.56
SMG9-208ENST00000598886 TKFCQ3LXA3 575 aa18.56■□□□□ 0.56
SMG9-208ENST00000598886 MCMDC2Q4G0Z9 681 aa18.56■□□□□ 0.56
SMG9-208ENST00000598886 BTNL9Q6UXG8 535 aa18.56■□□□□ 0.56
SMG9-208ENST00000598886 SLC17A8Q8NDX2 589 aa18.56■□□□□ 0.56
SMG9-208ENST00000598886 RANBP17Q9H2T7 1088 aaKnown RBP18.56■□□□□ 0.56
SMG9-208ENST00000598886 ELP1O95163 1332 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 SPTBN5Q9NRC6 3674 aaKnown RBP18.55■□□□□ 0.56
SMG9-208ENST00000598886 RANBP6O60518 1105 aaKnown RBP18.55■□□□□ 0.56
SMG9-208ENST00000598886 TTBK2Q6IQ55 1244 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 MORC4Q8TE76 937 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 DCAF4Q8WV16 495 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 TRERF1Q96PN7 1200 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 STARD7Q9NQZ5 370 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 TCP11L1Q9NUJ3 509 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 CYP39A1Q9NYL5 469 aa18.55■□□□□ 0.56
SMG9-208ENST00000598886 GNEQ9Y223 722 aaKnown RBP18.55■□□□□ 0.56
SMG9-208ENST00000598886 CTDP1Q9Y5B0 961 aaPredicted RBP18.55■□□□□ 0.56
SMG9-208ENST00000598886 GBF1Q92538 1859 aa18.54■□□□□ 0.56
SMG9-208ENST00000598886 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
SMG9-208ENST00000598886 ASGR1P07306 291 aa18.54■□□□□ 0.56
SMG9-208ENST00000598886 PTGS1P23219 599 aa18.54■□□□□ 0.56
SMG9-208ENST00000598886 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
SMG9-208ENST00000598886 TBC1D10CQ8IV04 446 aa18.54■□□□□ 0.56
SMG9-208ENST00000598886 NUP133Q8WUM0 1156 aa18.54■□□□□ 0.56
SMG9-208ENST00000598886 TMEM47Q9BQJ4 181 aa18.54■□□□□ 0.56
SMG9-208ENST00000598886 LNPKQ9C0E8 428 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms