RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 TMEM232C9JQI7 657 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 BMP3P12645 472 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 MCCP23508 829 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 PPARAQ07869 468 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 TOX2Q96NM4 488 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 COL25A1Q9BXS0 654 aaPredicted RBP13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 UPF3AQ9H1J1 476 aaKnown RBP13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 HOMER2Q9NSB8 354 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 CHD9Q3L8U1 2897 aa13.14□□□□□ -0.31
GRAMD1A-209ENST00000598580 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 PLXNA1Q9UIW2 1896 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 DUSP11O75319 330 aaKnown RBP13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 SMAD3P84022 425 aaKnown RBP13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 ZNF697Q5TEC3 545 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 ARMCX2Q7L311 632 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 ANKRD35Q8N283 1001 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 CHST13Q8NET6 341 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 GPATCH3Q96I76 525 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 A1CFQ9NQ94 594 aaKnown RBP13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 TMEM39AQ9NV64 488 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
GRAMD1A-209ENST00000598580 SPTBN5Q9NRC6 3674 aaKnown RBP13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 ASGR1P07306 291 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 RAG1P15918 1043 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 NOVP48745 357 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 OAZ1P54368 228 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 GJA9P57773 515 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 NKX3-2P78367 333 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 BEX3Q00994 111 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 MUM1L1Q5H9M0 696 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 STAG1Q8WVM7 1258 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 MYLIPQ8WY64 445 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 GMCL1Q96IK5 515 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 PDGFCQ9NRA1 345 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 GRIN2DO15399 1336 aa13.12□□□□□ -0.31
GRAMD1A-209ENST00000598580 MOXD2PA6NHM9 499 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 TIMP1P01033 207 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 C6orf222P0C671 652 aaPredicted RBP13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 TSPY3P0CV98 308 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 TSPY8P0CW00 308 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 MX1P20591 662 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 FPGSQ05932 587 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 TTBK2Q6IQ55 1244 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 RNPC3Q96LT9 517 aaKnown RBP13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.11□□□□□ -0.319e-9■■■□□ 19
GRAMD1A-209ENST00000598580 NAPBQ9H115 298 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 ABHD16BQ9H3Z7 469 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
GRAMD1A-209ENST00000598580 GRXCR1A8MXD5 290 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 FGRP09769 529 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 SMPD1P17405 629 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 SLC1A4P43007 532 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 PDE4BQ07343 736 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 GRIN2CQ14957 1233 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 GNASQ5JWF2 1037 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 TAPT1Q6NXT6 567 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 CCDC174Q6PII3 467 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 FAM126BQ8IXS8 530 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 FBXO40Q9UH90 709 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 PRR12Q9ULL5 1215 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 MCM3APO60318 1980 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 ELP1O95163 1332 aa13.1□□□□□ -0.31
GRAMD1A-209ENST00000598580 DCDC2CA8MYV0 355 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 ARVCFO00192 962 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 ERC2O15083 957 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 PLA2G6O60733 806 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 CD4P01730 458 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 ALAS1P13196 640 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 CSF2RAP15509 400 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 STAT2P52630 851 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 TMEM240Q5SV17 173 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 MFSD5Q6N075 450 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 SLC43A3Q8NBI5 491 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 MAFAQ8NHW3 353 aaPredicted RBP13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
GRAMD1A-209ENST00000598580 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms