RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 MTMR8Q96EF0 704 aa23.67■■□□□ 1.38
PNKP-211ENST00000598020 LZTS2Q9BRK4 669 aa23.67■■□□□ 1.38
PNKP-211ENST00000598020 BACH2Q9BYV9 841 aa23.67■■□□□ 1.38
PNKP-211ENST00000598020 C22orf23Q9BZE7 217 aa23.67■■□□□ 1.38
PNKP-211ENST00000598020 CPVLQ9H3G5 476 aa23.67■■□□□ 1.38
PNKP-211ENST00000598020 RIOX1Q9H6W3 641 aa23.67■■□□□ 1.38
PNKP-211ENST00000598020 SLC15A5A6NIM6 579 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 ZBTB43O43298 467 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 ECM2O94769 699 aaPredicted RBP23.66■■□□□ 1.38
PNKP-211ENST00000598020 PTPREP23469 700 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 MORN1Q5T089 497 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 FBXO46Q6PJ61 603 aaPredicted RBP23.66■■□□□ 1.38
PNKP-211ENST00000598020 NCAPG2Q86XI2 1143 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 ABRAQ8N0Z2 381 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 SOCS4Q8WXH5 440 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 USP6NLQ92738 828 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 JMJD4Q9H9V9 463 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 UPF2Q9HAU5 1272 aaKnown RBP23.66■■□□□ 1.38
PNKP-211ENST00000598020 PDRG1Q9NUG6 133 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 RIPK3Q9Y572 518 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 PLXNB2O15031 1838 aa23.66■■□□□ 1.38
PNKP-211ENST00000598020 KLF18A0A0U1RQI7 1052 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 PRKCZQ05513 592 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 IRF5Q13568 498 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 TOB2Q14106 344 aaPredicted RBP23.65■■□□□ 1.38
PNKP-211ENST00000598020 PPP2R5BQ15173 497 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 SLC35G1Q2M3R5 365 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 CCDC174Q6PII3 467 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 MICU3Q86XE3 530 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 CHST13Q8NET6 341 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 AGBL1Q96MI9 1066 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 FBXO40Q9UH90 709 aa23.65■■□□□ 1.38
PNKP-211ENST00000598020 BAZ2BQ9UIF8 2168 aaKnown RBP23.64■■□□□ 1.38
PNKP-211ENST00000598020 FLT3LGP49771 235 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 SNAP25P60880 206 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 APOBRQ0VD83 1088 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 GRB14Q14449 540 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 NUDT12Q9BQG2 462 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 SPZ1Q9BXG8 430 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 MCOLN1Q9GZU1 580 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 RBM28Q9NW13 759 aaKnown RBP23.64■■□□□ 1.37
PNKP-211ENST00000598020 GABRQQ9UN88 632 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 IVNS1ABPQ9Y6Y0 642 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 SMCHD1A6NHR9 2005 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 NID2Q14112 1375 aa23.64■■□□□ 1.37
PNKP-211ENST00000598020 ZNF236Q9UL36 1845 aa23.63■■□□□ 1.37
PNKP-211ENST00000598020 CYTH3O43739 400 aa23.63■■□□□ 1.37
PNKP-211ENST00000598020 RXRAP19793 462 aa23.63■■□□□ 1.37
PNKP-211ENST00000598020 CDC37Q16543 378 aaPredicted RBP23.63■■□□□ 1.37
PNKP-211ENST00000598020 WDR78Q5VTH9 848 aa23.63■■□□□ 1.37
PNKP-211ENST00000598020 NBPF11Q86T75 865 aa23.63■■□□□ 1.37
PNKP-211ENST00000598020 KIF2CQ99661 725 aa23.63■■□□□ 1.37
PNKP-211ENST00000598020 CWC22Q9HCG8 908 aaKnown RBP23.63■■□□□ 1.37
PNKP-211ENST00000598020 CCPG1Q9ULG6 757 aa23.63■■□□□ 1.37
PNKP-211ENST00000598020 ZNFX1Q9P2E3 1918 aaKnown RBP23.63■■□□□ 1.37
PNKP-211ENST00000598020 FCER1AP12319 257 aa23.62■■□□□ 1.37
PNKP-211ENST00000598020 XRCC5P13010 732 aaKnown RBP23.62■■□□□ 1.37
PNKP-211ENST00000598020 TMTC3Q6ZXV5 915 aa23.62■■□□□ 1.37
PNKP-211ENST00000598020 VAT1LQ9HCJ6 419 aa23.62■■□□□ 1.37
PNKP-211ENST00000598020 HPS5Q9UPZ3 1129 aa23.62■■□□□ 1.37
PNKP-211ENST00000598020 PTCH2Q9Y6C5 1203 aa23.62■■□□□ 1.37
PNKP-211ENST00000598020 MYH6P13533 1939 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 ZBTB5O15062 677 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 DHX16O60231 1041 aaKnown RBP23.61■■□□□ 1.37
PNKP-211ENST00000598020 HOXC6P09630 235 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 MAP2K5Q13163 448 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 RTN1Q16799 776 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 QRICH1Q2TAL8 776 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 RAB11FIP4Q86YS3 637 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 CCDC144CPQ8IYA2 1237 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 SRBD1Q8N5C6 995 aaKnown RBP23.61■■□□□ 1.37
PNKP-211ENST00000598020 RAET1EQ8TD07 263 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 ZNF274Q96GC6 653 aaPredicted RBP23.61■■□□□ 1.37
PNKP-211ENST00000598020 TRERF1Q96PN7 1200 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 ACAD9Q9H845 621 aa23.61■■□□□ 1.37
PNKP-211ENST00000598020 FAM217BQ9NTX9 383 aaPredicted RBP23.61■■□□□ 1.37
PNKP-211ENST00000598020 GOLGA8AA7E2F4 631 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 GOLGA8BA8MQT2 603 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 PLEKHA8P1O95397 391 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 ALAS1P13196 640 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 PDIA3P30101 505 aaKnown RBP23.6■■□□□ 1.37
PNKP-211ENST00000598020 RGS2P41220 211 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 ANKRD1Q15327 319 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 PXYLP1Q8TE99 480 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 MMP19Q99542 508 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 RNF146Q9NTX7 359 aa23.6■■□□□ 1.37
PNKP-211ENST00000598020 CCDC196A0A1B0GTZ2 297 aa23.59■■□□□ 1.37
PNKP-211ENST00000598020 ADORA2AP29274 412 aa23.59■■□□□ 1.37
PNKP-211ENST00000598020 METAP2P50579 478 aaKnown RBP eCLIP23.59■■□□□ 1.37
PNKP-211ENST00000598020 NEK4P51957 841 aa23.59■■□□□ 1.37
PNKP-211ENST00000598020 KCTD2Q14681 263 aa23.59■■□□□ 1.37
PNKP-211ENST00000598020 IL27Q8NEV9 243 aa23.59■■□□□ 1.37
PNKP-211ENST00000598020 TBC1D32Q96NH3 1257 aa23.59■■□□□ 1.37
PNKP-211ENST00000598020 MAF1Q9H063 256 aa23.59■■□□□ 1.37
PNKP-211ENST00000598020 PNMA6FA0A0J9YX94 578 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 SLC4A3P48751 1232 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 FUT2Q10981 343 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 TRAF1Q13077 416 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 FBXO11Q86XK2 927 aa23.58■■□□□ 1.37
PNKP-211ENST00000598020 TRMT44Q8IYL2 757 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms