RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NAP1L2Q9ULW6 460 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-213ENST00000597325 ATP11BQ9Y2G3 1177 aa14.08□□□□□ -0.16
SHKBP1-213ENST00000597325 ATAD5Q96QE3 1844 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 GPR37L1O60883 481 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 ADGRE1Q14246 886 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 SNX17Q15036 470 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 CCL14Q16627 93 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 SYNE3Q6ZMZ3 975 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 SH3RF1Q7Z6J0 888 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 FBXL16Q8N461 479 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 PROCA1Q8NCQ7 364 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 SOCS4Q8WXH5 440 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 LY9Q9HBG7 655 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 GINM1Q9NU53 330 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 DAXXQ9UER7 740 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 STX8Q9UNK0 236 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 LIMCH1Q9UPQ0 1083 aa14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 GREB1LQ9C091 1923 aaPredicted RBP14.07□□□□□ -0.16
SHKBP1-213ENST00000597325 DNM1LO00429 736 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 NMT2O60551 498 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 CTNND1O60716 968 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 GH2P01242 217 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 ASNSP08243 561 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 ITGB8P26012 769 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 CAP2P40123 477 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 LIFRP42702 1097 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 ICA1Q05084 483 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 APOBRQ0VD83 1088 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 RAB3GAP1Q15042 981 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 SLC39A5Q6ZMH5 540 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 ENAHQ8N8S7 591 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 TIFAQ96CG3 184 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 CEP95Q96GE4 821 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 AGXT2Q9BYV1 514 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 KAT14Q9H8E8 782 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 KANSL2Q9H9L4 492 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 PRDM5Q9NQX1 630 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 CXXC1Q9P0U4 656 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 ZBTB21Q9ULJ3 1066 aa14.06□□□□□ -0.16
SHKBP1-213ENST00000597325 KLF18A0A0U1RQI7 1052 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 GOLGA8BA8MQT2 603 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 TTLL1O95922 423 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 ATP2B2Q01814 1243 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 SEC23AQ15436 765 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 CCDC85BQ15834 202 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 CATIPQ7Z7H3 387 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 CCDC84Q86UT8 332 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 SGMS1Q86VZ5 419 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 LPAR1Q92633 364 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 ZSCAN31Q96LW9 406 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 ASCC2Q9H1I8 757 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 GPHNQ9NQX3 736 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 SH2B1Q9NRF2 756 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 IL17RBQ9NRM6 502 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 MTMR4Q9NYA4 1195 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
SHKBP1-213ENST00000597325 IGKV6D-41A0A0C4DH26 115 aa14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 SEPT2Q15019 361 aa14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 MORN1Q5T089 497 aa14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 LARP6Q9BRS8 491 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 TBC1D2Q9BYX2 928 aa14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 SH2D4AQ9H788 454 aa14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 ARHGEF10LQ9HCE6 1279 aa14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
SHKBP1-213ENST00000597325 TRIOO75962 3097 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 ZBTB43O43298 467 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 PEX10O60683 326 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 DDAH1O94760 285 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 HSP90AA1P07900 732 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 CALM1P0DP23 149 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 CALM2P0DP24 149 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 CALM3P0DP25 149 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 RRP1BQ14684 758 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 SHROOM1Q2M3G4 852 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 TRIM60Q495X7 471 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 MICU3Q86XE3 530 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 CLEC10AQ8IUN9 316 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 ZNF654Q8IZM8 581 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 ANKS1AQ92625 1134 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 KHSRPQ92945 711 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 CHMP4CQ96CF2 233 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 ZNF274Q96GC6 653 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 SLKQ9H2G2 1235 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 TXNRD2Q9NNW7 524 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 NYAP2Q9P242 653 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 CLIP2Q9UDT6 1046 aa14.03□□□□□ -0.16
SHKBP1-213ENST00000597325 DDX20Q9UHI6 824 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms