RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 RABGAP1Q9Y3P9 1069 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 RIPK3Q9Y572 518 aa18.03■□□□□ 0.48
SMCO4-206ENST00000596676 MYPNQ86TC9 1320 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 GPR25O00155 361 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 PFKFB2O60825 505 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 ERVK-9P63128 1117 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 ERVK-24P63145 666 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 NTRK3Q16288 839 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 CDC37Q16543 378 aaPredicted RBP18.02■□□□□ 0.48
SMCO4-206ENST00000596676 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 GPRC5AQ8NFJ5 357 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 PHKBQ93100 1093 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 MOV10L1Q9BXT6 1211 aaKnown RBP18.02■□□□□ 0.48
SMCO4-206ENST00000596676 SLKQ9H2G2 1235 aaPredicted RBP18.02■□□□□ 0.48
SMCO4-206ENST00000596676 EFCC1Q9HA90 598 aa18.02■□□□□ 0.48
SMCO4-206ENST00000596676 NID2Q14112 1375 aa18.02■□□□□ 0.47
SMCO4-206ENST00000596676 CNTNAP5Q8WYK1 1306 aa18.01■□□□□ 0.47
SMCO4-206ENST00000596676 ST18O60284 1047 aa18.01■□□□□ 0.47
SMCO4-206ENST00000596676 CTDNEP1O95476 244 aa18.01■□□□□ 0.47
SMCO4-206ENST00000596676 HSPA8P11142 646 aaKnown RBP18.01■□□□□ 0.47
SMCO4-206ENST00000596676 RCAN1P53805 252 aa18.01■□□□□ 0.47
SMCO4-206ENST00000596676 ZNF296Q8WUU4 475 aaPredicted RBP18.01■□□□□ 0.47
SMCO4-206ENST00000596676 MTMR8Q96EF0 704 aa18.01■□□□□ 0.47
SMCO4-206ENST00000596676 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
SMCO4-206ENST00000596676 RBM28Q9NW13 759 aaKnown RBP18.01■□□□□ 0.47
SMCO4-206ENST00000596676 CTDP1Q9Y5B0 961 aaPredicted RBP18.01■□□□□ 0.47
SMCO4-206ENST00000596676 STAT3P40763 770 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 GNAQP50148 359 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 FAM110CQ1W6H9 321 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 USH1GQ495M9 461 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 SNRNP48Q6IEG0 339 aaKnown RBP18■□□□□ 0.47
SMCO4-206ENST00000596676 CCDC83Q8IWF9 413 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 CD99L2Q8TCZ2 262 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 HOMER2Q9NSB8 354 aa18■□□□□ 0.47
SMCO4-206ENST00000596676 V9GY48 417 aaPredicted RBP18■□□□□ 0.47
SMCO4-206ENST00000596676 ALAS1P13196 640 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 LBX1P52954 281 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 SP3Q02447 781 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 MUM1L1Q5H9M0 696 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 MB21D1Q8N884 522 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 GTF3C6Q969F1 213 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 COA7Q96BR5 231 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 TMX3Q96JJ7 454 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 MYH6P13533 1939 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 CASP8AP2Q9UKL3 1982 aa17.99■□□□□ 0.47
SMCO4-206ENST00000596676 JAK2O60674 1132 aa17.98■□□□□ 0.47
SMCO4-206ENST00000596676 ERCC3P19447 782 aa17.98■□□□□ 0.47
SMCO4-206ENST00000596676 NCAPG2Q86XI2 1143 aa17.98■□□□□ 0.47
SMCO4-206ENST00000596676 GTF3C2Q8WUA4 911 aaPredicted RBP17.98■□□□□ 0.47
SMCO4-206ENST00000596676 LZTS2Q9BRK4 669 aa17.98■□□□□ 0.47
SMCO4-206ENST00000596676 SLC26A6Q9BXS9 759 aa17.98■□□□□ 0.47
SMCO4-206ENST00000596676 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
SMCO4-206ENST00000596676 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
SMCO4-206ENST00000596676 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 ZBTB5O15062 677 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 FKTNO75072 461 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 ICAM1P05362 532 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 IFNAR1P17181 557 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 LACTBP83111 547 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-206ENST00000596676 PKN1Q16512 942 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 WDR78Q5VTH9 848 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 FBXO11Q86XK2 927 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 RIOX2Q8IUF8 465 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 TBC1D5Q92609 795 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 GPKOWQ92917 476 aaPredicted RBP eCLIP17.97■□□□□ 0.47
SMCO4-206ENST00000596676 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
SMCO4-206ENST00000596676 TRIM47Q96LD4 638 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 ZSCAN31Q96LW9 406 aaPredicted RBP17.97■□□□□ 0.47
SMCO4-206ENST00000596676 AIFM3Q96NN9 605 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 TEX13BQ9BXU2 312 aa17.97■□□□□ 0.47
SMCO4-206ENST00000596676 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 CPLX1O14810 134 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 ATP2A1O14983 1001 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 FDX1P10109 184 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 PSMC4P43686 418 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 PPP2R5BQ15173 497 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 CLEC4DQ8WXI8 215 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 SHISA4Q96DD7 197 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 TRERF1Q96PN7 1200 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 RNF146Q9NTX7 359 aa17.96■□□□□ 0.47
SMCO4-206ENST00000596676 MGAMO43451 1857 aa17.95■□□□□ 0.46
SMCO4-206ENST00000596676 NFIBO00712 420 aa17.95■□□□□ 0.46
SMCO4-206ENST00000596676 OAZ1P54368 228 aa17.95■□□□□ 0.46
SMCO4-206ENST00000596676 TYW1BQ6NUM6 668 aa17.95■□□□□ 0.46
SMCO4-206ENST00000596676 NSUN7Q8NE18 718 aaKnown RBP17.95■□□□□ 0.46
SMCO4-206ENST00000596676 DDX11Q96FC9 970 aa17.95■□□□□ 0.46
SMCO4-206ENST00000596676 OPLAHO14841 1288 aa17.94■□□□□ 0.46
SMCO4-206ENST00000596676 ADAMTS3O15072 1205 aa17.94■□□□□ 0.46
SMCO4-206ENST00000596676 PRPF3O43395 683 aaKnown RBP17.94■□□□□ 0.46
SMCO4-206ENST00000596676 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-206ENST00000596676 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
SMCO4-206ENST00000596676 CTCFP49711 727 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-206ENST00000596676 SSRP1Q08945 709 aaKnown RBP17.94■□□□□ 0.46
SMCO4-206ENST00000596676 WWC2Q6AWC2 1192 aa17.94■□□□□ 0.46
SMCO4-206ENST00000596676 GPR142Q7Z601 462 aa17.94■□□□□ 0.46
SMCO4-206ENST00000596676 AMNQ9BXJ7 453 aa17.94■□□□□ 0.46
SMCO4-206ENST00000596676 SH2B1Q9NRF2 756 aaPredicted RBP17.94■□□□□ 0.46
SMCO4-206ENST00000596676 GJB4Q9NTQ9 266 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms