RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 IRX5P78411 483 aaPredicted RBP18.93■□□□□ 0.62
LINC02560-201ENST00000596379 SMAD3P84022 425 aaKnown RBP18.93■□□□□ 0.62
LINC02560-201ENST00000596379 CCDC144BQ3MJ40 725 aa18.93■□□□□ 0.62
LINC02560-201ENST00000596379 ANKRD33Q7Z3H0 272 aa18.93■□□□□ 0.62
LINC02560-201ENST00000596379 CDX2Q99626 313 aaPredicted RBP18.93■□□□□ 0.62
LINC02560-201ENST00000596379 ABHD16BQ9H3Z7 469 aa18.93■□□□□ 0.62
LINC02560-201ENST00000596379 HOMER2Q9NSB8 354 aa18.93■□□□□ 0.62
LINC02560-201ENST00000596379 ISY1Q9ULR0 285 aaKnown RBP18.93■□□□□ 0.62
LINC02560-201ENST00000596379 A0A0C4DFX4 3053 aa18.92■□□□□ 0.62
LINC02560-201ENST00000596379 C6orf222P0C671 652 aaPredicted RBP18.92■□□□□ 0.62
LINC02560-201ENST00000596379 FDX1P10109 184 aa18.92■□□□□ 0.62
LINC02560-201ENST00000596379 ARMCX2Q7L311 632 aa18.92■□□□□ 0.62
LINC02560-201ENST00000596379 RNPC3Q96LT9 517 aaKnown RBP18.92■□□□□ 0.62
LINC02560-201ENST00000596379 LAMA2P24043 3122 aaKnown RBP18.92■□□□□ 0.62
LINC02560-201ENST00000596379 CUL9Q8IWT3 2517 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 MCCP23508 829 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 CST5P28325 142 aaPredicted RBP18.91■□□□□ 0.62
LINC02560-201ENST00000596379 STAT2P52630 851 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 CNTN2Q02246 1040 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 FPGSQ05932 587 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.91■□□□□ 0.62
LINC02560-201ENST00000596379 CCDC144CPQ8IYA2 1237 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 PCSK9Q8NBP7 692 aaKnown RBP18.91■□□□□ 0.62
LINC02560-201ENST00000596379 CHURC1Q8WUH1 139 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 STAG1Q8WVM7 1258 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 AGBL1Q96MI9 1066 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 GLT1D1Q96MS3 346 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 TTYH1Q9H313 450 aaPredicted RBP18.91■□□□□ 0.62
LINC02560-201ENST00000596379 SPC25Q9HBM1 224 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 INCENPQ9NQS7 918 aa18.91■□□□□ 0.62
LINC02560-201ENST00000596379 ASGR1P07306 291 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 MX1P20591 662 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 SLC1A4P43007 532 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 GJA9P57773 515 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 IKQ13123 557 aaPredicted RBP18.9■□□□□ 0.62
LINC02560-201ENST00000596379 CCDC129Q6ZRS4 1044 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 FAM160B2Q86V87 743 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 GMCL1Q96IK5 515 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 KATNBL1Q9H079 304 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 UPF3AQ9H1J1 476 aaKnown RBP18.9■□□□□ 0.62
LINC02560-201ENST00000596379 ACAD9Q9H845 621 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 ZNF536O15090 1300 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 ELP1O95163 1332 aa18.9■□□□□ 0.62
LINC02560-201ENST00000596379 TIMP1P01033 207 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 CDK7P50613 346 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 GNASQ5JWF2 1037 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 KCTD1Q719H9 257 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 FAM133AQ8N9E0 248 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.61
LINC02560-201ENST00000596379 IL17RBQ9NRM6 502 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 RNF146Q9NTX7 359 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 STX8Q9UNK0 236 aa18.89■□□□□ 0.61
LINC02560-201ENST00000596379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
LINC02560-201ENST00000596379 SOWAHBA6NEL2 793 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 TSPY2A6NKD2 308 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 FOXP2O15409 715 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 NMT2O60551 498 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 PPP4R3BQ5MIZ7 849 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 RCSD1Q6JBY9 416 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 MYLIPQ8WY64 445 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 COL25A1Q9BXS0 654 aaPredicted RBP18.88■□□□□ 0.61
LINC02560-201ENST00000596379 TBX21Q9UL17 535 aa18.88■□□□□ 0.61
LINC02560-201ENST00000596379 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.87■□□□□ 0.61
LINC02560-201ENST00000596379 ARVCFO00192 962 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 CTAGE5O15320 804 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 PLA2G6O60733 806 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 ALAS1P13196 640 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 SNAP25P60880 206 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 TKFCQ3LXA3 575 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 MROH7Q68CQ1 1323 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 CCDC174Q6PII3 467 aa18.87■□□□□ 0.61
LINC02560-201ENST00000596379 SALL3Q9BXA9 1300 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 A0A0U1RQG5 324 aaPredicted RBP18.86■□□□□ 0.61
LINC02560-201ENST00000596379 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
LINC02560-201ENST00000596379 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
LINC02560-201ENST00000596379 RANBP6O60518 1105 aaKnown RBP18.86■□□□□ 0.61
LINC02560-201ENST00000596379 BEX3Q00994 111 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 TNFAIP2Q03169 654 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 ANKRD45Q5TZF3 282 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 VPS53Q5VIR6 699 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 MFSD5Q6N075 450 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 NOL8Q76FK4 1167 aaKnown RBP18.86■□□□□ 0.61
LINC02560-201ENST00000596379 RASGRP2Q7LDG7 609 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 MAFAQ8NHW3 353 aaPredicted RBP18.86■□□□□ 0.61
LINC02560-201ENST00000596379 PRR12Q9ULL5 1215 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 MTMR7Q9Y216 660 aa18.86■□□□□ 0.61
LINC02560-201ENST00000596379 ASB14A6NK59 587 aa18.85■□□□□ 0.61
LINC02560-201ENST00000596379 NKX3-2P78367 333 aa18.85■□□□□ 0.61
LINC02560-201ENST00000596379 MUM1L1Q5H9M0 696 aa18.85■□□□□ 0.61
LINC02560-201ENST00000596379 EVI5LQ96CN4 794 aa18.85■□□□□ 0.61
LINC02560-201ENST00000596379 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.85■□□□□ 0.61
LINC02560-201ENST00000596379 ZBTB47Q9UFB7 747 aaPredicted RBP18.85■□□□□ 0.61
LINC02560-201ENST00000596379 ANAPC4Q9UJX5 808 aa18.85■□□□□ 0.61
LINC02560-201ENST00000596379 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
LINC02560-201ENST00000596379 UNC80Q8N2C7 3258 aa18.84■□□□□ 0.61
LINC02560-201ENST00000596379 ASTN1O14525 1302 aa18.84■□□□□ 0.61
LINC02560-201ENST00000596379 C16orf59Q7L2K0 433 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms