RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 ZNF280CQ8ND82 737 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 KIAA1683Q9H0B3 1180 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 CPVLQ9H3G5 476 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 ZSCAN16Q9H4T2 348 aaPredicted RBP15.06■□□□□ 0
SHKBP1-209ENST00000595803 SSC5DA1L4H1 1573 aa15.06■□□□□ 0
SHKBP1-209ENST00000595803 MANSC4A6NHS7 340 aaPredicted RBP15.05■□□□□ -0
SHKBP1-209ENST00000595803 C19orf81C9J6K1 198 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 TMEM232C9JQI7 657 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 SOX1O00570 391 aaPredicted RBP15.05■□□□□ -0
SHKBP1-209ENST00000595803 GNL2Q13823 731 aaKnown RBP15.05■□□□□ -0
SHKBP1-209ENST00000595803 MAP3K11Q16584 847 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 FERMT3Q86UX7 667 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 HOMER1Q86YM7 354 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 ADGRF4Q8IZF3 695 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 CHURC1Q8WUH1 139 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 PIGSQ96S52 555 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 NUP88Q99567 741 aaPredicted RBP15.05■□□□□ -0
SHKBP1-209ENST00000595803 GJB4Q9NTQ9 266 aa15.05■□□□□ -0
SHKBP1-209ENST00000595803 ATAD5Q96QE3 1844 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 MYCP01106 439 aaPredicted RBP15.04■□□□□ -0
SHKBP1-209ENST00000595803 BACE1P56817 501 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 NLRP5P59047 1200 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 CRHR2Q13324 411 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 VGLL4Q14135 290 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 SLC35G1Q2M3R5 365 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 KIAA1755Q5JYT7 1200 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 FAM83BQ5T0W9 1011 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 FAM160B2Q86V87 743 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 LPAR1Q92633 364 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 LRCH3Q96II8 777 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 COL25A1Q9BXS0 654 aaPredicted RBP15.04■□□□□ -0
SHKBP1-209ENST00000595803 JMJD4Q9H9V9 463 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 SH3GLB2Q9NR46 395 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 TMOD4Q9NZQ9 345 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 VPS54Q9P1Q0 977 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 FEM1BQ9UK73 627 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 PTCH2Q9Y6C5 1203 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 SNCAIPQ9Y6H5 919 aa15.04■□□□□ -0
SHKBP1-209ENST00000595803 PNMA6FA0A0J9YX94 578 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 TRIM75PA6NK02 468 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 WDR46O15213 610 aaKnown RBP15.03■□□□□ -0
SHKBP1-209ENST00000595803 BAG4O95429 457 aaKnown RBP15.03■□□□□ -0
SHKBP1-209ENST00000595803 INHBEP58166 350 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 MTMR2Q13614 643 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 FOXD4L6Q3SYB3 417 aaPredicted RBP15.03■□□□□ -0
SHKBP1-209ENST00000595803 SYDE2Q5VT97 1194 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 BTNL9Q6UXG8 535 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 FOXD4L3Q6VB84 417 aaPredicted RBP15.03■□□□□ -0
SHKBP1-209ENST00000595803 HEATR3Q7Z4Q2 680 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 DPF3Q92784 378 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 ELP3Q9H9T3 547 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 BRMS1Q9HCU9 246 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 KCNJ14Q9UNX9 436 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 AFG3L2Q9Y4W6 797 aa15.03■□□□□ -0
SHKBP1-209ENST00000595803 DOCK1Q14185 1865 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 UNCXA6NJT0 531 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 PLA2G6O60733 806 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 MMP1P03956 469 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 STAT2P52630 851 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 SP3Q02447 781 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 PPATQ06203 517 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 RESTQ13127 1097 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 LDLRAD1Q5T700 205 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 CLEC17AQ6ZS10 378 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 ERO1BQ86YB8 467 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 FAM177A1Q8N128 213 aaPredicted RBP15.02■□□□□ -0
SHKBP1-209ENST00000595803 CCDC148Q8NFR7 591 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 CCDC12Q8WUD4 166 aaPredicted RBP15.02■□□□□ -0
SHKBP1-209ENST00000595803 SLC10A4Q96EP9 437 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 EMILIN3Q9NT22 766 aa15.02■□□□□ -0
SHKBP1-209ENST00000595803 MYH6P13533 1939 aa15.02□□□□□ -0.01
SHKBP1-209ENST00000595803 GOLGA6L22H0YM25 854 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 ZBTB5O15062 677 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 ZBTB48P10074 688 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 CALML3P27482 149 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 WWC2Q6AWC2 1192 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 GPKOWQ92917 476 aaPredicted RBP eCLIP15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 MTMR8Q96EF0 704 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 PHF20Q9BVI0 1012 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 BARHL2Q9NY43 387 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 PRR12Q9ULL5 1215 aa15.01□□□□□ -0.01
SHKBP1-209ENST00000595803 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
SHKBP1-209ENST00000595803 STXBP3O00186 592 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 KRT2P35908 639 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 HMGCS2P54868 508 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 NAPAP54920 295 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 TRAF1Q13077 416 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 NFKBIBQ15653 356 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 CDC37Q16543 378 aaPredicted RBP15□□□□□ -0.01
SHKBP1-209ENST00000595803 GALNT17Q6IS24 598 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
SHKBP1-209ENST00000595803 BRAPQ7Z569 592 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
SHKBP1-209ENST00000595803 KIFC2Q96AC6 838 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 SHISA4Q96DD7 197 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 CLMNQ96JQ2 1002 aa15□□□□□ -0.01
SHKBP1-209ENST00000595803 ZNF396Q96N95 335 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms