RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 SRGAP2O75044 1071 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
ZNF541-205ENST00000595558 AMPD2Q01433 879 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 PRR5LQ6MZQ0 368 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 CYP26C1Q6V0L0 522 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 PES1O00541 588 aaKnown RBP17.24■□□□□ 0.35
ZNF541-205ENST00000595558 LDHBP07195 334 aaKnown RBP17.24■□□□□ 0.35
ZNF541-205ENST00000595558 CLEC10AQ8IUN9 316 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 CCDC51Q96ER9 411 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 RBM28Q9NW13 759 aaKnown RBP17.24■□□□□ 0.35
ZNF541-205ENST00000595558 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 IRS2Q9Y4H2 1338 aa17.24■□□□□ 0.35
ZNF541-205ENST00000595558 CTAGE15A4D2H0 777 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 RIMBP2O15034 1052 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 GTPBP6O43824 516 aaPredicted RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 CTAGE8P0CG41 777 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 HDXQ7Z353 690 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 CTAGE6Q86UF2 777 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 CTAGE4Q8IX94 777 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 FNBP4Q8N3X1 1017 aaPredicted RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 LRRIQ3A6PVS8 624 aaPredicted RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 FGRP09769 529 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 SCG2P13521 617 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 ZNF658Q5TYW1 1059 aaPredicted RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 MEX3CQ5U5Q3 659 aaKnown RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 ANKRD2Q9GZV1 360 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 MYO6Q9UM54 1294 aa17.23■□□□□ 0.35
ZNF541-205ENST00000595558 EPN1Q9Y6I3 576 aaPredicted RBP17.23■□□□□ 0.35
ZNF541-205ENST00000595558 UFL1O94874 794 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 NDUFA10O95299 355 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 BMP15O95972 392 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 PARP1P09874 1014 aaKnown RBP17.22■□□□□ 0.35
ZNF541-205ENST00000595558 CASP8Q14790 479 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
ZNF541-205ENST00000595558 C4orf32Q8N8J7 132 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 NKRFO15226 690 aaKnown RBP eCLIP17.22■□□□□ 0.35
ZNF541-205ENST00000595558 KLK7P49862 253 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 GPS2Q13227 327 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 NAALADL2Q58DX5 795 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 WDR59Q6PJI9 974 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 RREB1Q92766 1687 aa17.22■□□□□ 0.35
ZNF541-205ENST00000595558 LAMB2P55268 1798 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 FOXR1Q6PIV2 292 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 CASZ1Q86V15 1759 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 CYTH3O43739 400 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 ATP1A1P05023 1023 aaKnown RBP17.21■□□□□ 0.35
ZNF541-205ENST00000595558 EIF6P56537 245 aaKnown RBP17.21■□□□□ 0.35
ZNF541-205ENST00000595558 HERVK_113P62684 666 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 PNMA1Q8ND90 353 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
ZNF541-205ENST00000595558 GDAP1L1Q96MZ0 367 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 HINFPQ9BQA5 517 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 POLLQ9UGP5 575 aa17.21■□□□□ 0.35
ZNF541-205ENST00000595558 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
ZNF541-205ENST00000595558 TNRC6CQ9HCJ0 1690 aaKnown RBP17.21■□□□□ 0.35
ZNF541-205ENST00000595558 ZMYND10O75800 440 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 DDAH1O94760 285 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 TRIM37O94972 964 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 STAT6P42226 847 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 GRAPQ13588 217 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 WHAMMP3Q1A5X7 153 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 GRAPLQ8TC17 118 aaPredicted RBP17.2■□□□□ 0.34
ZNF541-205ENST00000595558 MMS19Q96T76 1030 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 TMEM60Q9H2L4 133 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 RCCD1A6NED2 376 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 VGLL3A8MV65 326 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 TRIM66O15016 1216 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 PFKFB3Q16875 520 aaPredicted RBP17.2■□□□□ 0.34
ZNF541-205ENST00000595558 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 MB21D1Q8N884 522 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 BBXQ8WY36 941 aaPredicted RBP17.2■□□□□ 0.34
ZNF541-205ENST00000595558 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 CAPZA3Q96KX2 299 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 UIMC1Q96RL1 719 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 ATP8A2Q9NTI2 1148 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 AGPAT5Q9NUQ2 364 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 BTAF1O14981 1849 aa17.2■□□□□ 0.34
ZNF541-205ENST00000595558 CALM1P0DP23 149 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 CALM2P0DP24 149 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 CALM3P0DP25 149 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 GYS1P13807 737 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 ADSSL1Q8N142 457 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 RPGRQ92834 1020 aaKnown RBP17.19■□□□□ 0.34
ZNF541-205ENST00000595558 KAT14Q9H8E8 782 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 FEZ2Q9UHY8 353 aaPredicted RBP17.19■□□□□ 0.34
ZNF541-205ENST00000595558 DUSP10Q9Y6W6 482 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 ERLIN1O75477 346 aa17.19■□□□□ 0.34
ZNF541-205ENST00000595558 C6orf229H3BNL8 230 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
ZNF541-205ENST00000595558 ORC4O43929 436 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms