RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 MSL3Q8N5Y2 521 aaKnown RBP15.31■□□□□ 0.04
SCAF1-202ENST00000595242 HLA-CQ95604 372 aa15.31■□□□□ 0.04
SCAF1-202ENST00000595242 ZHX1Q9UKY1 873 aaPredicted RBP15.31■□□□□ 0.04
SCAF1-202ENST00000595242 ADAMTS5Q9UNA0 930 aa15.31■□□□□ 0.04
SCAF1-202ENST00000595242 POLR3DP05423 398 aaPredicted RBP15.3■□□□□ 0.04
SCAF1-202ENST00000595242 ZAP70P43403 619 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 GNASQ5JWF2 1037 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 KRT40Q6A162 431 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 HIPK3Q9H422 1215 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 CERS4Q9HA82 394 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 SPC25Q9HBM1 224 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 CD320Q9NPF0 282 aa15.3■□□□□ 0.04
SCAF1-202ENST00000595242 BAZ2AQ9UIF9 1905 aaKnown RBP15.29■□□□□ 0.04
SCAF1-202ENST00000595242 PRR33A8MZF0 331 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 ADCY6O43306 1168 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 SMARCA5O60264 1052 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-202ENST00000595242 IDH1O75874 414 aaKnown RBP15.29■□□□□ 0.04
SCAF1-202ENST00000595242 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
SCAF1-202ENST00000595242 STAT3P40763 770 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 RBM25P49756 843 aaKnown RBP15.29■□□□□ 0.04
SCAF1-202ENST00000595242 CCL23P55773 120 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 GABPAQ06546 454 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 OTUD7AQ8TE49 926 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-202ENST00000595242 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 EXOC6BQ9Y2D4 811 aa15.29■□□□□ 0.04
SCAF1-202ENST00000595242 EPOPA6NHQ4 379 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 ZBBXA8MT70 800 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 WDR46O15213 610 aaKnown RBP15.28■□□□□ 0.04
SCAF1-202ENST00000595242 CA3P07451 260 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 PDE1AP54750 535 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 GJA9P57773 515 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 TMEM67Q5HYA8 995 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 MAMDC4Q6UXC1 1216 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 TMEM179Q6ZVK1 233 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 SIAH1Q8IUQ4 282 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 RPUSD2Q8IZ73 545 aaKnown RBP15.28■□□□□ 0.04
SCAF1-202ENST00000595242 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
SCAF1-202ENST00000595242 UPF3AQ9H1J1 476 aaKnown RBP15.28■□□□□ 0.04
SCAF1-202ENST00000595242 VCPKMTQ9H867 229 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 ARHGEF10LQ9HCE6 1279 aa15.28■□□□□ 0.04
SCAF1-202ENST00000595242 COL4A4P53420 1690 aaPredicted RBP15.28■□□□□ 0.04
SCAF1-202ENST00000595242 VWA5AO00534 786 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 EVX2Q03828 476 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 ACVR2BQ13705 512 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 CCDC144BQ3MJ40 725 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 TNNI3KQ59H18 835 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 CLEC10AQ8IUN9 316 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 C22orf23Q9BZE7 217 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 FBXO28Q9NVF7 368 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.04
SCAF1-202ENST00000595242 TMX2Q9Y320 296 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 FPGT-TNNI3KV9GXZ4 949 aa15.27■□□□□ 0.04
SCAF1-202ENST00000595242 TRIP12Q14669 1992 aaPredicted RBP15.26■□□□□ 0.03
SCAF1-202ENST00000595242 PTPRSQ13332 1948 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 COPB2P35606 906 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 MFAP1P55081 439 aaKnown RBP15.26■□□□□ 0.03
SCAF1-202ENST00000595242 KIF1BPQ96EK5 621 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 DDX11Q96FC9 970 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 UIMC1Q96RL1 719 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 NOC4LQ9BVI4 516 aaKnown RBP15.26■□□□□ 0.03
SCAF1-202ENST00000595242 WNT8AQ9H1J5 351 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 GPR108Q9NPR9 543 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 ZNF318Q5VUA4 2279 aa15.26■□□□□ 0.03
SCAF1-202ENST00000595242 TET1Q8NFU7 2136 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 CTAGE5O15320 804 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 MX1P20591 662 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 NHLH1Q02575 133 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 SLC43A3Q8NBI5 491 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 ARNTL2Q8WYA1 636 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 VWCEQ96DN2 955 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 ABHD16BQ9H3Z7 469 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 MCM9Q9NXL9 1143 aa15.25■□□□□ 0.03
SCAF1-202ENST00000595242 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.25■□□□□ 0.03
SCAF1-202ENST00000595242 DNAJC25-GNG10A0A024R161 153 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 SDSP20132 328 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 BEX3Q00994 111 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 ICA1Q05084 483 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 ITGA7Q13683 1181 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 TTLL4Q14679 1199 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 CXCL17Q6UXB2 119 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 ZNF467Q7Z7K2 595 aaPredicted RBP15.24■□□□□ 0.03
SCAF1-202ENST00000595242 REPS2Q8NFH8 660 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 SCLYQ96I15 445 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
SCAF1-202ENST00000595242 TRPV6Q9H1D0 765 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 PPP1R9AQ9ULJ8 1098 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 TRIOO75962 3097 aa15.24■□□□□ 0.03
SCAF1-202ENST00000595242 USP34Q70CQ2 3546 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 B4GALT4O60513 344 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 SURF6O75683 361 aaKnown RBP15.23■□□□□ 0.03
SCAF1-202ENST00000595242 AKR1B1P15121 316 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 NKX3-2P78367 333 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 TAP1Q03518 808 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 BECN1Q14457 450 aa15.23■□□□□ 0.03
SCAF1-202ENST00000595242 CSPP1Q1MSJ5 1256 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms