RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 DLL3Q9NYJ7 618 aa14.58□□□□□ -0.08
ZNF558-202ENST00000593891 ZNF292O60281 2723 aa14.58□□□□□ -0.08
ZNF558-202ENST00000593891 GRIN2DO15399 1336 aa14.58□□□□□ -0.08
ZNF558-202ENST00000593891 EP300Q09472 2414 aaPredicted RBP14.57□□□□□ -0.08
ZNF558-202ENST00000593891 ZBTB22O15209 634 aa14.57□□□□□ -0.08
ZNF558-202ENST00000593891 HLA-DOAP06340 250 aa14.57□□□□□ -0.08
ZNF558-202ENST00000593891 CYP2C9P11712 490 aa14.57□□□□□ -0.08
ZNF558-202ENST00000593891 LTBRP36941 435 aa14.57□□□□□ -0.08
ZNF558-202ENST00000593891 NKX3-2P78367 333 aa14.57□□□□□ -0.08
ZNF558-202ENST00000593891 RABL6Q3YEC7 729 aaPredicted RBP14.57□□□□□ -0.08
ZNF558-202ENST00000593891 MAMDC4Q6UXC1 1216 aa14.57□□□□□ -0.08
ZNF558-202ENST00000593891 ALDH8A1Q9H2A2 487 aaPredicted RBP14.57□□□□□ -0.08
ZNF558-202ENST00000593891 BICC1Q9H694 974 aaKnown RBP14.57□□□□□ -0.08
ZNF558-202ENST00000593891 SH2B1Q9NRF2 756 aaPredicted RBP14.57□□□□□ -0.08
ZNF558-202ENST00000593891 DNAH14Q0VDD8 3507 aa14.57□□□□□ -0.08
ZNF558-202ENST00000593891 MAP1BP46821 2468 aaKnown RBP14.56□□□□□ -0.08
ZNF558-202ENST00000593891 EYA2O00167 538 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 CTAGE5O15320 804 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 ADCY6O43306 1168 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 ALDH1L1O75891 902 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 GJB5O95377 273 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 WDR5P61964 334 aaKnown RBP14.56□□□□□ -0.08
ZNF558-202ENST00000593891 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
ZNF558-202ENST00000593891 NOL8Q76FK4 1167 aaKnown RBP14.56□□□□□ -0.08
ZNF558-202ENST00000593891 TMCO2Q7Z6W1 182 aaPredicted RBP14.56□□□□□ -0.08
ZNF558-202ENST00000593891 SH3RF3Q8TEJ3 882 aaPredicted RBP14.56□□□□□ -0.08
ZNF558-202ENST00000593891 RIPOR3Q96MK2 946 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 ABHD16BQ9H3Z7 469 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 CABP5Q9NP86 173 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 PALD1Q9ULE6 856 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 FAM208BQ5VWN6 2430 aa14.56□□□□□ -0.08
ZNF558-202ENST00000593891 DMDP11532 3685 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 LOC730098B7Z3J9 87 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 FLOT1O75955 427 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 IQCF3P0C7M6 154 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 COPB2P35606 906 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 RASGRF1Q13972 1273 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 MAPKAPK5Q8IW41 473 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 ATG4CQ96DT6 458 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 C17orf80Q9BSJ5 609 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 CD207Q9UJ71 328 aa14.55□□□□□ -0.08
ZNF558-202ENST00000593891 PDS5AQ29RF7 1337 aaKnown RBP14.55□□□□□ -0.08
ZNF558-202ENST00000593891 BAG3O95817 575 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 PSMC6P62333 389 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 CBX2Q14781 532 aaPredicted RBP14.54□□□□□ -0.08
ZNF558-202ENST00000593891 TMEM132BQ14DG7 1078 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 ABCB5Q2M3G0 1257 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 CCDC102BQ68D86 513 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 RIOX2Q8IUF8 465 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 ZNF384Q8TF68 577 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 NSUN4Q96CB9 384 aaKnown RBP14.54□□□□□ -0.08
ZNF558-202ENST00000593891 DDX11Q96FC9 970 aa14.54□□□□□ -0.08
ZNF558-202ENST00000593891 TRMT13Q9NUP7 481 aaKnown RBP14.54□□□□□ -0.08
ZNF558-202ENST00000593891 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.54□□□□□ -0.08
ZNF558-202ENST00000593891 USP24Q9UPU5 2620 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 MYH13Q9UKX3 1938 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 NBPF7P0C2Y1 421 aaPredicted RBP14.53□□□□□ -0.08
ZNF558-202ENST00000593891 PLCG2P16885 1265 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 GPM6BQ13491 265 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 WDR43Q15061 677 aaKnown RBP eCLIP14.53□□□□□ -0.08
ZNF558-202ENST00000593891 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
ZNF558-202ENST00000593891 CTC1Q2NKJ3 1217 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 TATDN1Q6P1N9 297 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 SAMD11Q96NU1 681 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 AP5M1Q9H0R1 490 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
ZNF558-202ENST00000593891 SETXQ7Z333 2677 aaKnown RBP14.52□□□□□ -0.08
ZNF558-202ENST00000593891 GPR179Q6PRD1 2367 aa14.52□□□□□ -0.08
ZNF558-202ENST00000593891 FLT1P17948 1338 aa14.52□□□□□ -0.08
ZNF558-202ENST00000593891 PDGFBP01127 241 aaPredicted RBP14.52□□□□□ -0.09
ZNF558-202ENST00000593891 LMNAP02545 664 aaKnown RBP14.52□□□□□ -0.09
ZNF558-202ENST00000593891 STAT3P40763 770 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 DEFB103AP81534 67 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 DLX2Q07687 328 aaPredicted RBP14.52□□□□□ -0.09
ZNF558-202ENST00000593891 CERKLQ49MI3 558 aaPredicted RBP14.52□□□□□ -0.09
ZNF558-202ENST00000593891 KIAA0319Q5VV43 1072 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 ZNF467Q7Z7K2 595 aaPredicted RBP14.52□□□□□ -0.09
ZNF558-202ENST00000593891 ANKRD44Q8N8A2 993 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 SEMA4AQ9H3S1 761 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 RAI14Q9P0K7 980 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 INSL6Q9Y581 213 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 WDR87Q6ZQQ6 2873 aa14.52□□□□□ -0.09
ZNF558-202ENST00000593891 H3BNC9 293 aa14.51□□□□□ -0.09
ZNF558-202ENST00000593891 TNFAIP2Q03169 654 aa14.51□□□□□ -0.09
ZNF558-202ENST00000593891 BFSP2Q13515 415 aa14.51□□□□□ -0.09
ZNF558-202ENST00000593891 EPC2Q52LR7 807 aa14.51□□□□□ -0.09
ZNF558-202ENST00000593891 TMEM105Q8N8V8 129 aa14.51□□□□□ -0.09
ZNF558-202ENST00000593891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.51□□□□□ -0.09
ZNF558-202ENST00000593891 TSR2Q969E8 191 aaKnown RBP14.51□□□□□ -0.09
ZNF558-202ENST00000593891 HINFPQ9BQA5 517 aa14.51□□□□□ -0.09
ZNF558-202ENST00000593891 SAP30BPQ9UHR5 308 aaKnown RBP14.51□□□□□ -0.09
ZNF558-202ENST00000593891 HOXB3P14651 431 aaPredicted RBP14.5□□□□□ -0.09
ZNF558-202ENST00000593891 ICAM3P32942 547 aa14.5□□□□□ -0.09
ZNF558-202ENST00000593891 RSPO4Q2I0M5 234 aaPredicted RBP14.5□□□□□ -0.09
ZNF558-202ENST00000593891 FAM117BQ6P1L5 589 aa14.5□□□□□ -0.09
ZNF558-202ENST00000593891 SLC4A10Q6U841 1118 aa14.5□□□□□ -0.09
ZNF558-202ENST00000593891 MAGEB6Q8N7X4 407 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms