RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 KCNA10Q16322 511 aa26.9■■□□□ 1.9
SSBP4-203ENST00000593641 KLHDC9Q8NEP7 349 aa26.9■■□□□ 1.9
SSBP4-203ENST00000593641 OTUD7AQ8TE49 926 aaPredicted RBP26.9■■□□□ 1.9
SSBP4-203ENST00000593641 TOX2Q96NM4 488 aa26.9■■□□□ 1.9
SSBP4-203ENST00000593641 DCDC2CA8MYV0 355 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 ITGB8P26012 769 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 SLC1A4P43007 532 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 SMAD3P84022 425 aaKnown RBP26.89■■□□□ 1.9
SSBP4-203ENST00000593641 ARMCX2Q7L311 632 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 ANKRD33Q7Z3H0 272 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 FAM160B2Q86V87 743 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 CHURC1Q8WUH1 139 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 GLT1D1Q96MS3 346 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 ACAD9Q9H845 621 aa26.89■■□□□ 1.9
SSBP4-203ENST00000593641 CDH23Q9H251 3354 aa26.88■■□□□ 1.89
SSBP4-203ENST00000593641 C6orf222P0C671 652 aaPredicted RBP26.88■■□□□ 1.89
SSBP4-203ENST00000593641 CST5P28325 142 aaPredicted RBP26.88■■□□□ 1.89
SSBP4-203ENST00000593641 PCSK9Q8NBP7 692 aaKnown RBP26.88■■□□□ 1.89
SSBP4-203ENST00000593641 GMCL1Q96IK5 515 aa26.88■■□□□ 1.89
SSBP4-203ENST00000593641 RNPC3Q96LT9 517 aaKnown RBP26.88■■□□□ 1.89
SSBP4-203ENST00000593641 STX8Q9UNK0 236 aa26.88■■□□□ 1.89
SSBP4-203ENST00000593641 MROH7Q68CQ1 1323 aa26.88■■□□□ 1.89
SSBP4-203ENST00000593641 TSPY2A6NKD2 308 aa26.87■■□□□ 1.89
SSBP4-203ENST00000593641 FPGSQ05932 587 aa26.87■■□□□ 1.89
SSBP4-203ENST00000593641 CCDC144BQ3MJ40 725 aa26.87■■□□□ 1.89
SSBP4-203ENST00000593641 STAG1Q8WVM7 1258 aa26.87■■□□□ 1.89
SSBP4-203ENST00000593641 FGD4Q96M96 766 aa26.87■■□□□ 1.89
SSBP4-203ENST00000593641 MYADML2A6NDP7 307 aa26.86■■□□□ 1.89
SSBP4-203ENST00000593641 FAAP100Q0VG06 881 aa26.86■■□□□ 1.89
SSBP4-203ENST00000593641 CCSAPQ6IQ19 270 aaPredicted RBP26.86■■□□□ 1.89
SSBP4-203ENST00000593641 CCDC144CPQ8IYA2 1237 aa26.86■■□□□ 1.89
SSBP4-203ENST00000593641 RNF146Q9NTX7 359 aa26.86■■□□□ 1.89
SSBP4-203ENST00000593641 ELP1O95163 1332 aa26.86■■□□□ 1.89
SSBP4-203ENST00000593641 MCCP23508 829 aa26.85■■□□□ 1.89
SSBP4-203ENST00000593641 VTI1AQ96AJ9 217 aa26.85■■□□□ 1.89
SSBP4-203ENST00000593641 CHMP4CQ96CF2 233 aa26.85■■□□□ 1.89
SSBP4-203ENST00000593641 SEMA6BQ9H3T3 888 aa26.85■■□□□ 1.89
SSBP4-203ENST00000593641 ASGR1P07306 291 aa26.84■■□□□ 1.89
SSBP4-203ENST00000593641 GJA9P57773 515 aa26.84■■□□□ 1.89
SSBP4-203ENST00000593641 TKFCQ3LXA3 575 aa26.84■■□□□ 1.89
SSBP4-203ENST00000593641 CCDC129Q6ZRS4 1044 aa26.84■■□□□ 1.89
SSBP4-203ENST00000593641 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.84■■□□□ 1.89
SSBP4-203ENST00000593641 CDX2Q99626 313 aaPredicted RBP26.84■■□□□ 1.89
SSBP4-203ENST00000593641 UPF3AQ9H1J1 476 aaKnown RBP26.84■■□□□ 1.89
SSBP4-203ENST00000593641 A1CFQ9NQ94 594 aaKnown RBP26.84■■□□□ 1.89
SSBP4-203ENST00000593641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.84■■□□□ 1.89
SSBP4-203ENST00000593641 ADCY6O43306 1168 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 EPHB4P54760 987 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 CNTN2Q02246 1040 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 CTDSPL2Q05D32 466 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 GNASQ5JWF2 1037 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 FAM133AQ8N9E0 248 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 AGBL1Q96MI9 1066 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 EYSQ5T1H1 3165 aa26.83■■□□□ 1.89
SSBP4-203ENST00000593641 RANBP6O60518 1105 aaKnown RBP26.82■■□□□ 1.88
SSBP4-203ENST00000593641 PLA2G6O60733 806 aa26.82■■□□□ 1.88
SSBP4-203ENST00000593641 ALAS1P13196 640 aa26.82■■□□□ 1.88
SSBP4-203ENST00000593641 KCTD1Q719H9 257 aa26.82■■□□□ 1.88
SSBP4-203ENST00000593641 TRERF1Q96PN7 1200 aa26.82■■□□□ 1.88
SSBP4-203ENST00000593641 ZNF536O15090 1300 aa26.82■■□□□ 1.88
SSBP4-203ENST00000593641 A0A0U1RQG5 324 aaPredicted RBP26.81■■□□□ 1.88
SSBP4-203ENST00000593641 ASB14A6NK59 587 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 FOXP2O15409 715 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 TIMP1P01033 207 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 IRX5P78411 483 aaPredicted RBP26.81■■□□□ 1.88
SSBP4-203ENST00000593641 RCSD1Q6JBY9 416 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 CCDC174Q6PII3 467 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 NOL8Q76FK4 1167 aaKnown RBP26.81■■□□□ 1.88
SSBP4-203ENST00000593641 EVI5LQ96CN4 794 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 KATNBL1Q9H079 304 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 TBX21Q9UL17 535 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 SALL3Q9BXA9 1300 aa26.81■■□□□ 1.88
SSBP4-203ENST00000593641 TMEM265A0A087WTH1 108 aa26.8■■□□□ 1.88
SSBP4-203ENST00000593641 ANKRD45Q5TZF3 282 aa26.8■■□□□ 1.88
SSBP4-203ENST00000593641 TTYH1Q9H313 450 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-203ENST00000593641 IL17RBQ9NRM6 502 aa26.8■■□□□ 1.88
SSBP4-203ENST00000593641 MTMR7Q9Y216 660 aa26.8■■□□□ 1.88
SSBP4-203ENST00000593641 LRRC37A2A6NM11 1700 aa26.79■■□□□ 1.88
SSBP4-203ENST00000593641 NMT2O60551 498 aa26.79■■□□□ 1.88
SSBP4-203ENST00000593641 RRP1P56182 461 aaKnown RBP26.79■■□□□ 1.88
SSBP4-203ENST00000593641 TNFAIP2Q03169 654 aa26.79■■□□□ 1.88
SSBP4-203ENST00000593641 INCENPQ9NQS7 918 aa26.79■■□□□ 1.88
SSBP4-203ENST00000593641 ANAPC4Q9UJX5 808 aa26.79■■□□□ 1.88
SSBP4-203ENST00000593641 PRR12Q9ULL5 1215 aa26.79■■□□□ 1.88
SSBP4-203ENST00000593641 MYO9BQ13459 2157 aa26.79■■□□□ 1.88
SSBP4-203ENST00000593641 ARVCFO00192 962 aa26.78■■□□□ 1.88
SSBP4-203ENST00000593641 TLR3O15455 904 aaKnown RBP26.78■■□□□ 1.88
SSBP4-203ENST00000593641 CDK7P50613 346 aa26.78■■□□□ 1.88
SSBP4-203ENST00000593641 CCDC96Q2M329 555 aa26.78■■□□□ 1.88
SSBP4-203ENST00000593641 VPS53Q5VIR6 699 aa26.78■■□□□ 1.88
SSBP4-203ENST00000593641 MFSD5Q6N075 450 aa26.78■■□□□ 1.88
SSBP4-203ENST00000593641 MAFAQ8NHW3 353 aaPredicted RBP26.78■■□□□ 1.88
SSBP4-203ENST00000593641 TOMM22Q9NS69 142 aa26.78■■□□□ 1.88
SSBP4-203ENST00000593641 CCPG1Q9ULG6 757 aa26.78■■□□□ 1.88
SSBP4-203ENST00000593641 PRUNE2Q8WUY3 3088 aa26.77■■□□□ 1.88
SSBP4-203ENST00000593641 SOWAHBA6NEL2 793 aa26.77■■□□□ 1.88
SSBP4-203ENST00000593641 ORC4O43929 436 aa26.77■■□□□ 1.88
SSBP4-203ENST00000593641 SNAP25P60880 206 aa26.77■■□□□ 1.88
SSBP4-203ENST00000593641 PPIGQ13427 754 aaKnown RBP eCLIP26.77■■□□□ 1.882e-7■■■□□ 19.1
SSBP4-203ENST00000593641 DCAF4Q8WV16 495 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms