RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PPP4R3BQ5MIZ7 849 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 KCTD1Q719H9 257 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 AGBL1Q96MI9 1066 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 TSEN34Q9BSV6 310 aaKnown RBP24.26■■□□□ 1.47
TRIM47-207ENST00000593089 ACAD9Q9H845 621 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 STARD7Q9NQZ5 370 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 IL17RBQ9NRM6 502 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 MTMR7Q9Y216 660 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 STXBP5LQ9Y2K9 1186 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 TACC3Q9Y6A5 838 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 COL6A3P12111 3177 aa24.26■■□□□ 1.47
TRIM47-207ENST00000593089 MYADML2A6NDP7 307 aa24.25■■□□□ 1.47
TRIM47-207ENST00000593089 RANBP6O60518 1105 aaKnown RBP24.25■■□□□ 1.47
TRIM47-207ENST00000593089 ARMCX2Q7L311 632 aa24.25■■□□□ 1.47
TRIM47-207ENST00000593089 RASGRP2Q7LDG7 609 aa24.25■■□□□ 1.47
TRIM47-207ENST00000593089 HELLSQ9NRZ9 838 aa24.25■■□□□ 1.47
TRIM47-207ENST00000593089 RNF146Q9NTX7 359 aa24.25■■□□□ 1.47
TRIM47-207ENST00000593089 DUSP11O75319 330 aaKnown RBP24.24■■□□□ 1.47
TRIM47-207ENST00000593089 ITGB8P26012 769 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 SNAP25P60880 206 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 IRX5P78411 483 aaPredicted RBP24.24■■□□□ 1.47
TRIM47-207ENST00000593089 CNTN2Q02246 1040 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 HDAC1Q13547 482 aaPredicted RBP24.24■■□□□ 1.47
TRIM47-207ENST00000593089 KCNA10Q16322 511 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 CCDC144BQ3MJ40 725 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 CCDC174Q6PII3 467 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 KLHDC9Q8NEP7 349 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 NUP133Q8WUM0 1156 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 FAM161BQ96MY7 647 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 ABHD16BQ9H3Z7 469 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 ANAPC4Q9UJX5 808 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 ZNF536O15090 1300 aa24.24■■□□□ 1.47
TRIM47-207ENST00000593089 MOXD2PA6NHM9 499 aa24.23■■□□□ 1.47
TRIM47-207ENST00000593089 POTEB2H3BUK9 544 aa24.23■■□□□ 1.47
TRIM47-207ENST00000593089 ADCY6O43306 1168 aa24.23■■□□□ 1.47
TRIM47-207ENST00000593089 C6orf222P0C671 652 aaPredicted RBP24.23■■□□□ 1.47
TRIM47-207ENST00000593089 RCSD1Q6JBY9 416 aa24.23■■□□□ 1.47
TRIM47-207ENST00000593089 CCDC144CPQ8IYA2 1237 aa24.23■■□□□ 1.47
TRIM47-207ENST00000593089 FAM227BQ96M60 508 aa24.23■■□□□ 1.47
TRIM47-207ENST00000593089 A1CFQ9NQ94 594 aaKnown RBP24.23■■□□□ 1.47
TRIM47-207ENST00000593089 TOMM22Q9NS69 142 aa24.23■■□□□ 1.47
TRIM47-207ENST00000593089 ALAS1P13196 640 aa24.22■■□□□ 1.47
TRIM47-207ENST00000593089 FAM109BQ6ICB4 259 aaPredicted RBP24.22■■□□□ 1.47
TRIM47-207ENST00000593089 CCSAPQ6IQ19 270 aaPredicted RBP24.22■■□□□ 1.47
TRIM47-207ENST00000593089 TRERF1Q96PN7 1200 aa24.22■■□□□ 1.47
TRIM47-207ENST00000593089 TMEM39AQ9NV64 488 aa24.22■■□□□ 1.47
TRIM47-207ENST00000593089 A0A0D9SFI3 127 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 KIAA0355O15063 1070 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 ORC4O43929 436 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 PLA2G6O60733 806 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 RAG1P15918 1043 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 TKFCQ3LXA3 575 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 FAM133AQ8N9E0 248 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 SPC25Q9HBM1 224 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 PRR12Q9ULL5 1215 aa24.21■■□□□ 1.47
TRIM47-207ENST00000593089 DCDC2CA8MYV0 355 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 CST5P28325 142 aaPredicted RBP24.2■■□□□ 1.46
TRIM47-207ENST00000593089 FAAP100Q0VG06 881 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 ALX1Q15699 326 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 CCDC96Q2M329 555 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 MCMDC2Q4G0Z9 681 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 RRP12Q5JTH9 1297 aaKnown RBP24.2■■□□□ 1.46
TRIM47-207ENST00000593089 ZNF697Q5TEC3 545 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 GLT1D1Q96MS3 346 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 GUCD1Q96NT3 240 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 LNPKQ9C0E8 428 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 KATNBL1Q9H079 304 aa24.2■■□□□ 1.46
TRIM47-207ENST00000593089 SOWAHBA6NEL2 793 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 FGAP02671 866 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 ASGR1P07306 291 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 GJA9P57773 515 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 NMIQ13287 307 aaPredicted RBP24.19■■□□□ 1.46
TRIM47-207ENST00000593089 MUM1L1Q5H9M0 696 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 ANKRD33Q7Z3H0 272 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 PCSK9Q8NBP7 692 aaKnown RBP24.19■■□□□ 1.46
TRIM47-207ENST00000593089 VTI1AQ96AJ9 217 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 TOX2Q96NM4 488 aa24.19■■□□□ 1.46
TRIM47-207ENST00000593089 UPF3AQ9H1J1 476 aaKnown RBP24.19■■□□□ 1.46
TRIM47-207ENST00000593089 TRIM6-TRIM34B2RNG4 842 aa24.18■■□□□ 1.46
TRIM47-207ENST00000593089 DLL1O00548 723 aa24.18■■□□□ 1.46
TRIM47-207ENST00000593089 FGRP09769 529 aa24.18■■□□□ 1.46
TRIM47-207ENST00000593089 EPHB4P54760 987 aa24.18■■□□□ 1.46
TRIM47-207ENST00000593089 GNASQ5JWF2 1037 aa24.18■■□□□ 1.46
TRIM47-207ENST00000593089 DCAF4Q8WV16 495 aa24.18■■□□□ 1.46
TRIM47-207ENST00000593089 CCPG1Q9ULG6 757 aa24.18■■□□□ 1.46
TRIM47-207ENST00000593089 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.17■■□□□ 1.46
TRIM47-207ENST00000593089 ASB14A6NK59 587 aa24.17■■□□□ 1.46
TRIM47-207ENST00000593089 HSPD1P10809 573 aaKnown RBP24.17■■□□□ 1.46
TRIM47-207ENST00000593089 NOVP48745 357 aa24.17■■□□□ 1.46
TRIM47-207ENST00000593089 FPGSQ05932 587 aa24.17■■□□□ 1.46
TRIM47-207ENST00000593089 TTBK2Q6IQ55 1244 aa24.17■■□□□ 1.46
TRIM47-207ENST00000593089 NOL8Q76FK4 1167 aaKnown RBP24.17■■□□□ 1.46
TRIM47-207ENST00000593089 ZNF589Q86UQ0 364 aaPredicted RBP24.17■■□□□ 1.46
TRIM47-207ENST00000593089 RILPL2Q969X0 211 aa24.17■■□□□ 1.46
TRIM47-207ENST00000593089 DDX49Q9Y6V7 483 aaKnown RBP24.17■■□□□ 1.46
TRIM47-207ENST00000593089 LRRC37A2A6NM11 1700 aa24.17■■□□□ 1.46
TRIM47-207ENST00000593089 ELP1O95163 1332 aa24.16■■□□□ 1.46
TRIM47-207ENST00000593089 SLC16A2P36021 539 aa24.16■■□□□ 1.46
TRIM47-207ENST00000593089 HAND2P61296 217 aa24.16■■□□□ 1.46
TRIM47-207ENST00000593089 TNFAIP2Q03169 654 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms