RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-215ENST00000592960 USP17L12C9JPN9 530 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 USP17L21D6R901 530 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 SMIM22K7EJ46 135 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 M0R2C6 588 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 MBD4O95243 580 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 TIMP1P01033 207 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 RBM25P49756 843 aaKnown RBP17.75■□□□□ 0.43
PKN1-215ENST00000592960 MAMDC4Q6UXC1 1216 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 NUP133Q8WUM0 1156 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 OSBP2Q969R2 916 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 PUS7LQ9H0K6 701 aaKnown RBP17.75■□□□□ 0.43
PKN1-215ENST00000592960 CNPY2Q9Y2B0 182 aa17.75■□□□□ 0.43
PKN1-215ENST00000592960 DNAJC25-GNG10A0A024R161 153 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 DNAJB2P25686 324 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 CDK7P50613 346 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
PKN1-215ENST00000592960 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 STARD7Q9NQZ5 370 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 TBX21Q9UL17 535 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 FAM184BQ9ULE4 1060 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 CHD7Q9P2D1 2997 aa17.74■□□□□ 0.43
PKN1-215ENST00000592960 ELP1O95163 1332 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 SYNGAP1Q96PV0 1343 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 CYP2D7A0A087X1C5 515 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 DUSP11O75319 330 aaKnown RBP17.73■□□□□ 0.43
PKN1-215ENST00000592960 SNAI1O95863 264 aaPredicted RBP17.73■□□□□ 0.43
PKN1-215ENST00000592960 PTH1RQ03431 593 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 KCNA10Q16322 511 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 TJAP1Q5JTD0 557 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 RASIP1Q5U651 963 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 ZNF467Q7Z7K2 595 aaPredicted RBP17.73■□□□□ 0.43
PKN1-215ENST00000592960 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.73■□□□□ 0.43
PKN1-215ENST00000592960 ZNF576Q9H609 170 aa17.73■□□□□ 0.43
PKN1-215ENST00000592960 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 ATP2A1O14983 1001 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 GPAA1O43292 621 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 CST5P28325 142 aaPredicted RBP17.72■□□□□ 0.43
PKN1-215ENST00000592960 ANP32AP39687 249 aaKnown RBP17.72■□□□□ 0.43
PKN1-215ENST00000592960 FAM83BQ5T0W9 1011 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 MFSD5Q6N075 450 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
PKN1-215ENST00000592960 C16orf59Q7L2K0 433 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 USP38Q8NB14 1042 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 LENG1Q96BZ8 264 aaPredicted RBP17.72■□□□□ 0.43
PKN1-215ENST00000592960 TIFAQ96CG3 184 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 TEX13BQ9BXU2 312 aa17.72■□□□□ 0.43
PKN1-215ENST00000592960 COL11A1P12107 1806 aaPredicted RBP17.71■□□□□ 0.43
PKN1-215ENST00000592960 CTR9Q6PD62 1173 aa17.71■□□□□ 0.43
PKN1-215ENST00000592960 MAP4K1Q92918 833 aa17.71■□□□□ 0.43
PKN1-215ENST00000592960 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
PKN1-215ENST00000592960 STRBPQ96SI9 672 aaKnown RBP17.71■□□□□ 0.43
PKN1-215ENST00000592960 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.436e-13■□□□□ 10.4
PKN1-215ENST00000592960 PLXNA1Q9UIW2 1896 aa17.71■□□□□ 0.43
PKN1-215ENST00000592960 MYH4Q9Y623 1939 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 NKX3-2P78367 333 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 TMEM240Q5SV17 173 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 PRPF38AQ8NAV1 312 aaKnown RBP17.7■□□□□ 0.42
PKN1-215ENST00000592960 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 GLT1D1Q96MS3 346 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 SLF1Q9BQI6 1058 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 NYAP2Q9P242 653 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 RIPK3Q9Y572 518 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 RBM8AQ9Y5S9 174 aaKnown RBP17.7■□□□□ 0.42
PKN1-215ENST00000592960 MROH7Q68CQ1 1323 aa17.7■□□□□ 0.42
PKN1-215ENST00000592960 HSPA4P34932 840 aa17.69■□□□□ 0.42
PKN1-215ENST00000592960 GJA9P57773 515 aa17.69■□□□□ 0.42
PKN1-215ENST00000592960 PPIGQ13427 754 aaKnown RBP eCLIP17.69■□□□□ 0.42
PKN1-215ENST00000592960 ACVR2BQ13705 512 aa17.69■□□□□ 0.42
PKN1-215ENST00000592960 AKNAD1Q5T1N1 836 aa17.69■□□□□ 0.42
PKN1-215ENST00000592960 PCSK9Q8NBP7 692 aaKnown RBP17.69■□□□□ 0.42
PKN1-215ENST00000592960 UPF3AQ9H1J1 476 aaKnown RBP17.69■□□□□ 0.42
PKN1-215ENST00000592960 SLC4A4Q9Y6R1 1079 aa17.69■□□□□ 0.42
PKN1-215ENST00000592960 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
PKN1-215ENST00000592960 MYADML2A6NDP7 307 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 GSG1L2A8MUP6 293 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 F5H6K3 240 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 ARVCFO00192 962 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 TNFRSF10AO00220 468 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 HSPD1P10809 573 aaKnown RBP17.68■□□□□ 0.42
PKN1-215ENST00000592960 KLRC3Q07444 240 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 SBK1Q52WX2 424 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 SNRNP48Q6IEG0 339 aaKnown RBP17.68■□□□□ 0.42
PKN1-215ENST00000592960 ATXN2LQ8WWM7 1075 aaKnown RBP17.68■□□□□ 0.42
PKN1-215ENST00000592960 ABHD16BQ9H3Z7 469 aa17.68■□□□□ 0.42
PKN1-215ENST00000592960 NDUFB10O96000 172 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 ASGR1P07306 291 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 GNAT2P19087 354 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 ANAPC15P60006 121 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 GIMAP6Q6P9H5 292 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 MKL1Q969V6 931 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 NUP88Q99567 741 aaPredicted RBP17.67■□□□□ 0.42
PKN1-215ENST00000592960 PBX4Q9BYU1 374 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 SPC25Q9HBM1 224 aa17.67■□□□□ 0.42
PKN1-215ENST00000592960 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.67■□□□□ 0.42
PKN1-215ENST00000592960 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms