RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 CTCFLQ8NI51 663 aaPredicted RBP11.58□□□□□ -0.56
TPM4-216ENST00000592822 AGBL1Q96MI9 1066 aa11.58□□□□□ -0.56
TPM4-216ENST00000592822 LARP6Q9BRS8 491 aaKnown RBP11.58□□□□□ -0.56
TPM4-216ENST00000592822 ALDH8A1Q9H2A2 487 aaPredicted RBP11.58□□□□□ -0.56
TPM4-216ENST00000592822 UPF2Q9HAU5 1272 aaKnown RBP11.58□□□□□ -0.56
TPM4-216ENST00000592822 VAT1LQ9HCJ6 419 aa11.58□□□□□ -0.56
TPM4-216ENST00000592822 HPS5Q9UPZ3 1129 aa11.58□□□□□ -0.56
TPM4-216ENST00000592822 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.56
TPM4-216ENST00000592822 ZNFX1Q9P2E3 1918 aaKnown RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 CYTH3O43739 400 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 DHX16O60231 1041 aaKnown RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 PLEKHA8P1O95397 391 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 SLC25A27O95847 323 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 ICAM1P05362 532 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 KIF5BP33176 963 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 NEK4P51957 841 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 CDC37Q16543 378 aaPredicted RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 COL13A1Q5TAT6 717 aaPredicted RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 GPR142Q7Z601 462 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 PLEKHH3Q7Z736 793 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 MTMR8Q96EF0 704 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 MROH8Q9H579 483 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 RIOX1Q9H6W3 641 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 FAM217BQ9NTX9 383 aaPredicted RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 GJD2Q9UKL4 321 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 NAP1L2Q9ULW6 460 aaPredicted RBP11.57□□□□□ -0.56
TPM4-216ENST00000592822 GABRQQ9UN88 632 aa11.57□□□□□ -0.56
TPM4-216ENST00000592822 GOLGA8AA7E2F4 631 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 GOLGA8BA8MQT2 603 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 PTPREP23469 700 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 HOXD10P28358 340 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 SMARCA1P28370 1054 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 PDIA3P30101 505 aaKnown RBP11.56□□□□□ -0.56
TPM4-216ENST00000592822 CDC27P30260 824 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 GNAQP50148 359 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 RCAN1P53805 252 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 AK2P54819 239 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 PRKCZQ05513 592 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 RTN1Q16799 776 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 MORN1Q5T089 497 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 WDR78Q5VTH9 848 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 TMTC3Q6ZXV5 915 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 CMTR1Q8N1G2 835 aaKnown RBP11.56□□□□□ -0.56
TPM4-216ENST00000592822 SRBD1Q8N5C6 995 aaKnown RBP11.56□□□□□ -0.56
TPM4-216ENST00000592822 USP6NLQ92738 828 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 COA7Q96BR5 231 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 LZTS2Q9BRK4 669 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 SRRDQ9UH36 339 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 CCPG1Q9ULG6 757 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 PTPN22Q9Y2R2 807 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 ZNF236Q9UL36 1845 aa11.56□□□□□ -0.56
TPM4-216ENST00000592822 NID2Q14112 1375 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 SLC15A5A6NIM6 579 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 STRNO43815 780 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 PPP1R11O60927 126 aaPredicted RBP11.55□□□□□ -0.56
TPM4-216ENST00000592822 ALAS1P13196 640 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 COPB2P35606 906 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 FLT3LGP49771 235 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 PRMT2P55345 433 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 FUT2Q10981 343 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 GRB14Q14449 540 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 QRICH1Q2TAL8 776 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 TKFCQ3LXA3 575 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 MUM1L1Q5H9M0 696 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 ZNF274Q96GC6 653 aaPredicted RBP11.55□□□□□ -0.56
TPM4-216ENST00000592822 PIGSQ96S52 555 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 SPZ1Q9BXG8 430 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 CWC22Q9HCG8 908 aaKnown RBP11.55□□□□□ -0.56
TPM4-216ENST00000592822 HOMER2Q9NSB8 354 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 RNF146Q9NTX7 359 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 RBM28Q9NW13 759 aaKnown RBP11.55□□□□□ -0.56
TPM4-216ENST00000592822 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
TPM4-216ENST00000592822 ZBTB5O15062 677 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 FCER1AP12319 257 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
TPM4-216ENST00000592822 METAP2P50579 478 aaKnown RBP eCLIP11.54□□□□□ -0.56
TPM4-216ENST00000592822 PPP2R5BQ15173 497 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 PKN2Q16513 984 aaKnown RBP11.54□□□□□ -0.56
TPM4-216ENST00000592822 USH1GQ495M9 461 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
TPM4-216ENST00000592822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
TPM4-216ENST00000592822 FBXO11Q86XK2 927 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 CCDC82Q8N4S0 544 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 CHST13Q8NET6 341 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 SOCS4Q8WXH5 440 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 CLEC4DQ8WXI8 215 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 PIBF1Q8WXW3 757 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 TRERF1Q96PN7 1200 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 MMP19Q99542 508 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 NCOA5Q9HCD5 579 aaKnown RBP11.54□□□□□ -0.56
TPM4-216ENST00000592822 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
TPM4-216ENST00000592822 PTCH2Q9Y6C5 1203 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms