RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 CTDP1Q9Y5B0 961 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-239ENST00000592467 RANBP2P49792 3224 aaKnown RBP23.76■■□□□ 1.39
CIRBP-239ENST00000592467 SGSM2O43147 1006 aa23.75■■□□□ 1.39
CIRBP-239ENST00000592467 ZNF865P0CJ78 1059 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-239ENST00000592467 SLC16A2P36021 539 aa23.75■■□□□ 1.39
CIRBP-239ENST00000592467 IKQ13123 557 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-239ENST00000592467 CCDC96Q2M329 555 aa23.75■■□□□ 1.39
CIRBP-239ENST00000592467 ZNF467Q7Z7K2 595 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-239ENST00000592467 PRO3102Q9H379 93 aa23.75■■□□□ 1.39
CIRBP-239ENST00000592467 COLQQ9Y215 455 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-239ENST00000592467 FRMPD2Q68DX3 1309 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-239ENST00000592467 EVI5O60447 810 aa23.74■■□□□ 1.39
CIRBP-239ENST00000592467 SNAI1O95863 264 aaPredicted RBP23.74■■□□□ 1.39
CIRBP-239ENST00000592467 ZNF543Q08ER8 600 aa23.74■■□□□ 1.39
CIRBP-239ENST00000592467 ANO1Q5XXA6 986 aa23.74■■□□□ 1.39
CIRBP-239ENST00000592467 SKAP1Q86WV1 359 aa23.74■■□□□ 1.39
CIRBP-239ENST00000592467 MSL3Q8N5Y2 521 aaKnown RBP23.74■■□□□ 1.39
CIRBP-239ENST00000592467 DDX11Q96FC9 970 aa23.74■■□□□ 1.39
CIRBP-239ENST00000592467 A1CFQ9NQ94 594 aaKnown RBP23.74■■□□□ 1.39
CIRBP-239ENST00000592467 HOMER2Q9NSB8 354 aa23.74■■□□□ 1.39
CIRBP-239ENST00000592467 RNF146Q9NTX7 359 aa23.74■■□□□ 1.39
CIRBP-239ENST00000592467 TKFCQ3LXA3 575 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 HABP4Q5JVS0 413 aaKnown RBP23.73■■□□□ 1.39
CIRBP-239ENST00000592467 SYDE2Q5VT97 1194 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 CCDC174Q6PII3 467 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 ACAD9Q9H845 621 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 GPCPD1Q9NPB8 672 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 NR2E3Q9Y5X4 410 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 TAF6LQ9Y6J9 622 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 SYNGAP1Q96PV0 1343 aa23.73■■□□□ 1.39
CIRBP-239ENST00000592467 DNM1LO00429 736 aa23.72■■□□□ 1.39
CIRBP-239ENST00000592467 CYP21A2P08686 494 aa23.72■■□□□ 1.39
CIRBP-239ENST00000592467 MUM1L1Q5H9M0 696 aa23.72■■□□□ 1.39
CIRBP-239ENST00000592467 ANKRD35Q8N283 1001 aa23.72■■□□□ 1.39
CIRBP-239ENST00000592467 ENAHQ8N8S7 591 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-239ENST00000592467 FAM133AQ8N9E0 248 aa23.72■■□□□ 1.39
CIRBP-239ENST00000592467 RUFY2Q8WXA3 655 aa23.72■■□□□ 1.39
CIRBP-239ENST00000592467 ZSCAN10Q96SZ4 725 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-239ENST00000592467 LRRC37A2A6NM11 1700 aa23.72■■□□□ 1.39
CIRBP-239ENST00000592467 ASTN1O14525 1302 aa23.71■■□□□ 1.39
CIRBP-239ENST00000592467 ICAM1P05362 532 aa23.71■■□□□ 1.39
CIRBP-239ENST00000592467 CNTN2Q02246 1040 aa23.71■■□□□ 1.39
CIRBP-239ENST00000592467 LRRC26Q2I0M4 334 aa23.71■■□□□ 1.39
CIRBP-239ENST00000592467 TRERF1Q96PN7 1200 aa23.71■■□□□ 1.39
CIRBP-239ENST00000592467 TNKSO95271 1327 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 SLC34A2O95436 690 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 ALAS1P13196 640 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 GJC2Q5T442 439 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-239ENST00000592467 CYB5R4Q7L1T6 521 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 CENPQQ7L2Z9 268 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-239ENST00000592467 IQCA1Q86XH1 822 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 KRT23Q9C075 422 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 KATNBL1Q9H079 304 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 CNNM2Q9H8M5 875 aa23.7■■□□□ 1.38
CIRBP-239ENST00000592467 SOWAHBA6NEL2 793 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 SEC23AQ15436 765 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 CCDC178Q5BJE1 867 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 CHRDL2Q6WN34 429 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 C7orf61Q8IZ16 206 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 PNMA1Q8ND90 353 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 MAP4K1Q92918 833 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 CCPG1Q9ULG6 757 aa23.69■■□□□ 1.38
CIRBP-239ENST00000592467 GOLGA8HP0CJ92 632 aa23.68■■□□□ 1.38
CIRBP-239ENST00000592467 LRRC41Q15345 812 aa23.68■■□□□ 1.38
CIRBP-239ENST00000592467 LENG1Q96BZ8 264 aaPredicted RBP23.68■■□□□ 1.38
CIRBP-239ENST00000592467 SENP6Q9GZR1 1112 aaPredicted RBP23.68■■□□□ 1.38
CIRBP-239ENST00000592467 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.68■■□□□ 1.38
CIRBP-239ENST00000592467 CYP39A1Q9NYL5 469 aa23.68■■□□□ 1.38
CIRBP-239ENST00000592467 ADCY6O43306 1168 aa23.67■■□□□ 1.38
CIRBP-239ENST00000592467 AKR1A1P14550 325 aa23.67■■□□□ 1.38
CIRBP-239ENST00000592467 STOX1Q6ZVD7 989 aa23.67■■□□□ 1.38
CIRBP-239ENST00000592467 ARMCX2Q7L311 632 aa23.67■■□□□ 1.38
CIRBP-239ENST00000592467 ARRDC4Q8NCT1 418 aa23.67■■□□□ 1.38
CIRBP-239ENST00000592467 CPVLQ9H3G5 476 aa23.67■■□□□ 1.38
CIRBP-239ENST00000592467 RBM27Q9P2N5 1060 aaKnown RBP23.67■■□□□ 1.38
CIRBP-239ENST00000592467 CNPY2Q9Y2B0 182 aa23.67■■□□□ 1.38
CIRBP-239ENST00000592467 U3KPZ7 1027 aaPredicted RBP23.67■■□□□ 1.38
CIRBP-239ENST00000592467 POTEB2H3BUK9 544 aa23.66■■□□□ 1.38
CIRBP-239ENST00000592467 ADAMTS4O75173 837 aa23.66■■□□□ 1.38
CIRBP-239ENST00000592467 GPATCH4Q5T3I0 446 aaKnown RBP23.66■■□□□ 1.38
CIRBP-239ENST00000592467 CCDC144CPQ8IYA2 1237 aa23.66■■□□□ 1.38
CIRBP-239ENST00000592467 CLEC4DQ8WXI8 215 aa23.66■■□□□ 1.38
CIRBP-239ENST00000592467 KAT14Q9H8E8 782 aa23.66■■□□□ 1.38
CIRBP-239ENST00000592467 XPNPEP3Q9NQH7 507 aa23.66■■□□□ 1.38
CIRBP-239ENST00000592467 NFIBO00712 420 aa23.65■■□□□ 1.38
CIRBP-239ENST00000592467 RARBP10826 455 aa23.65■■□□□ 1.38
CIRBP-239ENST00000592467 ACVR2BQ13705 512 aa23.65■■□□□ 1.38
CIRBP-239ENST00000592467 PURBQ96QR8 312 aaKnown RBP23.65■■□□□ 1.38
CIRBP-239ENST00000592467 UBA5Q9GZZ9 404 aa23.65■■□□□ 1.38
CIRBP-239ENST00000592467 PCDH10Q9P2E7 1040 aa23.65■■□□□ 1.38
CIRBP-239ENST00000592467 ZMYND8Q9ULU4 1186 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-239ENST00000592467 TRIOBPQ9H2D6 2365 aa23.65■■□□□ 1.38
CIRBP-239ENST00000592467 WDR19Q8NEZ3 1342 aa23.64■■□□□ 1.38
CIRBP-239ENST00000592467 E7EWF7 191 aa23.64■■□□□ 1.37
CIRBP-239ENST00000592467 PGK1P00558 417 aa23.64■■□□□ 1.37
CIRBP-239ENST00000592467 GDF15Q99988 308 aa23.64■■□□□ 1.37
CIRBP-239ENST00000592467 LSG1Q9H089 658 aaKnown RBP23.64■■□□□ 1.37
CIRBP-239ENST00000592467 ABHD16BQ9H3Z7 469 aa23.64■■□□□ 1.37
CIRBP-239ENST00000592467 ZHX1Q9UKY1 873 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-239ENST00000592467 DDX49Q9Y6V7 483 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms