RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 STXBP5LQ9Y2K9 1186 aa22.33■■□□□ 1.17
CCDC43-205ENST00000592333 A0A1W2PQ45 241 aaPredicted RBP22.32■■□□□ 1.16
CCDC43-205ENST00000592333 A0A1W2PQY0 241 aa22.32■■□□□ 1.16
CCDC43-205ENST00000592333 POTEB2H3BUK9 544 aa22.32■■□□□ 1.16
CCDC43-205ENST00000592333 NT5C2P49902 561 aa22.32■■□□□ 1.16
CCDC43-205ENST00000592333 TLE2Q04725 743 aa22.32■■□□□ 1.16
CCDC43-205ENST00000592333 CCSAPQ6IQ19 270 aaPredicted RBP22.32■■□□□ 1.16
CCDC43-205ENST00000592333 PCSK9Q8NBP7 692 aaKnown RBP22.32■■□□□ 1.16
CCDC43-205ENST00000592333 SPC25Q9HBM1 224 aa22.32■■□□□ 1.16
CCDC43-205ENST00000592333 TCP11L1Q9NUJ3 509 aa22.32■■□□□ 1.16
CCDC43-205ENST00000592333 MTMR10Q9NXD2 777 aa22.32■■□□□ 1.16
CCDC43-205ENST00000592333 ELP1O95163 1332 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 SYNRGQ9UMZ2 1314 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 CLTBP09497 229 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 MCCP23508 829 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 ACLYP53396 1101 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 NKX3-2P78367 333 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 CCDC129Q6ZRS4 1044 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 FAM133AQ8N9E0 248 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 PRDM5Q9NQX1 630 aaPredicted RBP22.31■■□□□ 1.16
CCDC43-205ENST00000592333 ZNF536O15090 1300 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 MROH7Q68CQ1 1323 aa22.31■■□□□ 1.16
CCDC43-205ENST00000592333 ASB14A6NK59 587 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 KIAA0355O15063 1070 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 RANBP6O60518 1105 aaKnown RBP22.3■■□□□ 1.16
CCDC43-205ENST00000592333 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 GJA9P57773 515 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 CTDSPL2Q05D32 466 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 IKQ13123 557 aaPredicted RBP22.3■■□□□ 1.16
CCDC43-205ENST00000592333 ARMCX2Q7L311 632 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 DCAF4Q8WV16 495 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 FGD4Q96M96 766 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 UPF3AQ9H1J1 476 aaKnown RBP22.3■■□□□ 1.16
CCDC43-205ENST00000592333 RWDD1Q9H446 243 aaPredicted RBP22.3■■□□□ 1.16
CCDC43-205ENST00000592333 STARD7Q9NQZ5 370 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 ZHX1Q9UKY1 873 aaPredicted RBP22.3■■□□□ 1.16
CCDC43-205ENST00000592333 PNMA2Q9UL42 364 aa22.3■■□□□ 1.16
CCDC43-205ENST00000592333 TRIM43BA6NCK2 446 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 FGAP02671 866 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 MFAP1P55081 439 aaKnown RBP22.29■■□□□ 1.16
CCDC43-205ENST00000592333 CCDC144BQ3MJ40 725 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 VPS53Q5VIR6 699 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 SMC5Q8IY18 1101 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 BADQ92934 168 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 TRIM43Q96BQ3 446 aaPredicted RBP22.29■■□□□ 1.16
CCDC43-205ENST00000592333 GLT1D1Q96MS3 346 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 TTC14Q96N46 770 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 A1CFQ9NQ94 594 aaKnown RBP22.29■■□□□ 1.16
CCDC43-205ENST00000592333 RNF146Q9NTX7 359 aa22.29■■□□□ 1.16
CCDC43-205ENST00000592333 LOC102724159A0A0B4J2E5 919 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 DCDC2CA8MYV0 355 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 PWP2Q15269 919 aaKnown RBP22.28■■□□□ 1.16
CCDC43-205ENST00000592333 KCNA10Q16322 511 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 BTNL9Q6UXG8 535 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 CCDC144CPQ8IYA2 1237 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 SLC17A8Q8NDX2 589 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 TRERF1Q96PN7 1200 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 SEZ6LQ9BYH1 1024 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 KATNBL1Q9H079 304 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 PRR12Q9ULL5 1215 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 ISY1Q9ULR0 285 aaKnown RBP22.28■■□□□ 1.16
CCDC43-205ENST00000592333 COL6A3P12111 3177 aa22.28■■□□□ 1.16
CCDC43-205ENST00000592333 HSPD1P10809 573 aaKnown RBP22.27■■□□□ 1.16
CCDC43-205ENST00000592333 TOP1P11387 765 aaKnown RBP22.27■■□□□ 1.16
CCDC43-205ENST00000592333 SHHQ15465 462 aa22.27■■□□□ 1.16
CCDC43-205ENST00000592333 Q7L0L9 218 aa22.27■■□□□ 1.16
CCDC43-205ENST00000592333 SH3RF1Q7Z6J0 888 aa22.27■■□□□ 1.16
CCDC43-205ENST00000592333 AGBL1Q96MI9 1066 aa22.27■■□□□ 1.16
CCDC43-205ENST00000592333 OSBPL3Q9H4L5 887 aa22.27■■□□□ 1.16
CCDC43-205ENST00000592333 HOMER2Q9NSB8 354 aa22.27■■□□□ 1.16
CCDC43-205ENST00000592333 NMT2O60551 498 aa22.26■■□□□ 1.15
CCDC43-205ENST00000592333 ICAM1P05362 532 aa22.26■■□□□ 1.15
CCDC43-205ENST00000592333 RAG1P15918 1043 aa22.26■■□□□ 1.15
CCDC43-205ENST00000592333 SMAD3P84022 425 aaKnown RBP22.26■■□□□ 1.15
CCDC43-205ENST00000592333 KCTD1Q719H9 257 aa22.26■■□□□ 1.15
CCDC43-205ENST00000592333 FAM227BQ96M60 508 aa22.26■■□□□ 1.15
CCDC43-205ENST00000592333 Q9Y3F1 56 aa22.26■■□□□ 1.15
CCDC43-205ENST00000592333 A0A0D9SFI3 127 aa22.25■■□□□ 1.15
CCDC43-205ENST00000592333 C6orf222P0C671 652 aaPredicted RBP22.25■■□□□ 1.15
CCDC43-205ENST00000592333 ALAS1P13196 640 aa22.25■■□□□ 1.15
CCDC43-205ENST00000592333 CDK7P50613 346 aa22.25■■□□□ 1.15
CCDC43-205ENST00000592333 LENG1Q96BZ8 264 aaPredicted RBP22.25■■□□□ 1.15
CCDC43-205ENST00000592333 RANBP17Q9H2T7 1088 aaKnown RBP22.25■■□□□ 1.15
CCDC43-205ENST00000592333 RNF41Q9H4P4 317 aaPredicted RBP22.25■■□□□ 1.15
CCDC43-205ENST00000592333 INCENPQ9NQS7 918 aa22.25■■□□□ 1.15
CCDC43-205ENST00000592333 TMEM39AQ9NV64 488 aa22.25■■□□□ 1.15
CCDC43-205ENST00000592333 CCDC171Q6TFL3 1326 aa22.25■■□□□ 1.15
CCDC43-205ENST00000592333 PQBP1O60828 265 aaKnown RBP22.24■■□□□ 1.15
CCDC43-205ENST00000592333 CABYRO75952 493 aa22.24■■□□□ 1.15
CCDC43-205ENST00000592333 ASGR1P07306 291 aa22.24■■□□□ 1.15
CCDC43-205ENST00000592333 CNTN2Q02246 1040 aa22.24■■□□□ 1.15
CCDC43-205ENST00000592333 FAAP100Q0VG06 881 aa22.24■■□□□ 1.15
CCDC43-205ENST00000592333 TOMM22Q9NS69 142 aa22.24■■□□□ 1.15
CCDC43-205ENST00000592333 CYP39A1Q9NYL5 469 aa22.24■■□□□ 1.15
CCDC43-205ENST00000592333 SOWAHBA6NEL2 793 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 TRIM6-TRIM34B2RNG4 842 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 TNFAIP2Q03169 654 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 NMIQ13287 307 aaPredicted RBP22.23■■□□□ 1.15
CCDC43-205ENST00000592333 GNASQ5JWF2 1037 aa22.23■■□□□ 1.15
CCDC43-205ENST00000592333 C9orf50Q5SZB4 431 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms