RNA–Protein interactions for RNA: ENST00000591472.6

SEPT9-238, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-238	ENST00000591472	GTF3C6	Q969F1	213 aa		13.92	□□□□□ -0.18
SEPT9-238	ENST00000591472	MTMR8	Q96EF0	704 aa		13.92	□□□□□ -0.18
SEPT9-238	ENST00000591472	VAT1L	Q9HCJ6	419 aa		13.92	□□□□□ -0.18
SEPT9-238	ENST00000591472	PNMA2	Q9UL42	364 aa		13.92	□□□□□ -0.18
SEPT9-238	ENST00000591472	CNTNAP5	Q8WYK1	1306 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	ZBTB5	O15062	677 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	ICAM1	P05362	532 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	IFNAR1	P17181	557 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	SNAP25	P60880	206 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	CCNA1	P78396	465 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	PLS1	Q14651	629 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	CDC37	Q16543	378 aa	Predicted RBP	13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	CCDC174	Q6PII3	467 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	CPLX2	Q6PUV4	134 aa	Known RBP	13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	CCDC82	Q8N4S0	544 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	NECAB1	Q8N987	351 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	RRP36	Q96EU6	259 aa	Known RBP	13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	TEX13B	Q9BXU2	312 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	SPATC1L	Q9H0A9	340 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	RAVER2	Q9HCJ3	691 aa	Known RBP	13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	ZNF214	Q9UL59	606 aa	Predicted RBP	13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	MYH6	P13533	1939 aa		13.91	□□□□□ -0.18
SEPT9-238	ENST00000591472	PNMA6F	A0A0J9YX94	578 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	GPR25	O00155	361 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	PEX10	O60683	326 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	CDKL5	O76039	1030 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	COPB2	P35606	906 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	STAT3	P40763	770 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	NTRK3	Q16288	839 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	QRICH1	Q2TAL8	776 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472		Q3C1V9	767 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	HOMER1	Q86YM7	354 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	RIOX2	Q8IUF8	465 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	CPXCR1	Q8N123	301 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	PIGS	Q96S52	555 aa		13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	RBM27	Q9P2N5	1060 aa	Known RBP	13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	SEC63	Q9UGP8	760 aa	Known RBP	13.9	□□□□□ -0.18
SEPT9-238	ENST00000591472	ZNF536	O15090	1300 aa		13.9	□□□□□ -0.19
SEPT9-238	ENST00000591472	SLC25A27	O95847	323 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	SP3	Q02447	781 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	TRAF1	Q13077	416 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	TKFC	Q3LXA3	575 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	SNRNP48	Q6IEG0	339 aa	Known RBP	13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	FBXO11	Q86XK2	927 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	SHCBP1	Q8NEM2	672 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	PIBF1	Q8WXW3	757 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	TMX3	Q96JJ7	454 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	AGBL1	Q96MI9	1066 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	CCPG1	Q9ULG6	757 aa		13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472		V9GY48	417 aa	Predicted RBP	13.89	□□□□□ -0.19
SEPT9-238	ENST00000591472	PRPF3	O43395	683 aa	Known RBP	13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	FKTN	O75072	461 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	HSPA1A	P0DMV8	641 aa	Known RBP	13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	HSPA1B	P0DMV9	641 aa	Known RBP	13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	MAPK4	P31152	587 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	AKAP17A	Q02040	695 aa	Known RBP	13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	SSRP1	Q08945	709 aa	Known RBP	13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	CUL4A	Q13619	759 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	CCDC83	Q8IWF9	413 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	TRIM22	Q8IYM9	498 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	PHKB	Q93100	1093 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	LLPH	Q9BRT6	129 aa	Known RBP	13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	AMN	Q9BXJ7	453 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	RNF26	Q9BY78	433 aa	Predicted RBP	13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	MROH8	Q9H579	483 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	TSKS	Q9UJT2	592 aa		13.88	□□□□□ -0.19
SEPT9-238	ENST00000591472	hCG_1642624	A0A1W2PR95	340 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	FOXN1	O15353	648 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	PPP1R11	O60927	126 aa	Predicted RBP	13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	FMNL1	O95466	1100 aa	Predicted RBP	13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	CTDNEP1	O95476	244 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	ALAS1	P13196	640 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	ERCC3	P19447	782 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	LACTB	P83111	547 aa	Predicted RBP	13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	KIF22	Q14807	665 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	USH1G	Q495M9	461 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	NCAPG2	Q86XI2	1143 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	HSCB	Q8IWL3	235 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	CCAR1	Q8IX12	1150 aa	Known RBP	13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	NSUN7	Q8NE18	718 aa	Known RBP	13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	CHST13	Q8NET6	341 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	SLC26A6	Q9BXS9	759 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	PORCN	Q9H237	461 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	FBXO40	Q9UH90	709 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	RIPK3	Q9Y572	518 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	PCDHA1	Q9Y5I3	950 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	ABCB11	O95342	1321 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	STK36	Q9NRP7	1315 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	MGAM	O43451	1857 aa		13.87	□□□□□ -0.19
SEPT9-238	ENST00000591472	SMCHD1	A6NHR9	2005 aa		13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472	hCG_1984214	I3L0E3	225 aa		13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472		K7ELQ4	463 aa	Predicted RBP	13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472	HSPA8	P11142	646 aa	Known RBP	13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472	SLC4A3	P48751	1232 aa		13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472	CTCF	P49711	727 aa	Predicted RBP	13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472	PFKFB3	Q16875	520 aa	Predicted RBP	13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.86	□□□□□ -0.19	4e-6	■■■■□ 26
SEPT9-238	ENST00000591472	ZNF713	Q8N859	430 aa	Predicted RBP	13.86	□□□□□ -0.19
SEPT9-238	ENST00000591472	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms