RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 P2RX5Q93086 422 aa19■□□□□ 0.63
SMARCA4-215ENST00000590574 CEP104O60308 925 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 CCDC174Q6PII3 467 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 DHTKD1Q96HY7 919 aaPredicted RBP18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 TEX33O43247 280 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 CHMP2AO43633 222 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 ZMYND10O75800 440 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 PPFIA1Q13136 1202 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 PAK2Q13177 524 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 TMTC3Q6ZXV5 915 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 GOLGA5Q8TBA6 731 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 MED4Q9NPJ6 270 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 HPS5Q9UPZ3 1129 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 LAD1O00515 517 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 NDUFA10O95299 355 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 BTDP43251 543 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 MECOMQ03112 1051 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 TRAF1Q13077 416 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 ENAHQ8N8S7 591 aaPredicted RBP18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 CCDC26Q8TAB7 109 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 GDAQ9Y2T3 454 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 ANKRD62A6NC57 917 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 USP17L8P0C7I0 530 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
SMARCA4-215ENST00000590574 PPARDQ03181 441 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 LRRC47Q8N1G4 583 aaKnown RBP18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 ANKRD13CQ8N6S4 541 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 GPATCH11Q8N954 259 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 IGDCC4Q8TDY8 1250 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 NUCKS1Q9H1E3 243 aaKnown RBP18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 TLDC2A0PJX2 215 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 MAGEF1Q9HAY2 307 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 FBXO2Q9UK22 296 aaPredicted RBP18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 FAN1Q9Y2M0 1017 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 HMGB2P26583 209 aaKnown RBP18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 MFSD14BQ5SR56 506 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 FRMD4BQ9Y2L6 1034 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 CC2D1AQ6P1N0 951 aaPredicted RBP18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 CUEDC2Q9H467 287 aa18.98■□□□□ 0.63
SMARCA4-215ENST00000590574 TRIM28Q13263 835 aaKnown RBP18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 RPS6KA1Q15418 735 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 FAM204AQ9H8W3 233 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 ABCB6Q9NP58 842 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 PXDNQ92626 1479 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 PLA2G12BQ9BX93 195 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 SLC1A4P43007 532 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 BICD1Q96G01 975 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 BRIP1Q9BX63 1249 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 NT5C3AQ9H0P0 336 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 PPP1R1BQ9UD71 204 aaPredicted RBP18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 DNM3Q9UQ16 869 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 CPLX4Q7Z7G2 160 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 GPBP1Q86WP2 473 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 WDR24Q96S15 920 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 PLVAPQ9BX97 442 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 THAP9Q9H5L6 903 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 PANK4Q9NVE7 773 aa18.97■□□□□ 0.63
SMARCA4-215ENST00000590574 NMT2O60551 498 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 CYP19A1P11511 503 aaPredicted RBP18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 TUBE1Q9UJT0 475 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 GUCY2FP51841 1108 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 FMR1Q06787 632 aaKnown RBP eCLIP18.96■□□□□ 0.634e-7■■■□□ 18.6
SMARCA4-215ENST00000590574 NYAP1Q6ZVC0 841 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 MB21D1Q8N884 522 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 DISC1Q9NRI5 854 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 ABHD10Q9NUJ1 306 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 GYS2P54840 703 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 B4GALNT4Q76KP1 1039 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 GLT8D2Q9H1C3 349 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 TCP1P17987 556 aaKnown RBP18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 POLR2FP61218 127 aaKnown RBP18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 AK8Q96MA6 479 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 PLCD4Q9BRC7 762 aa18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 NHEJ1Q9H9Q4 299 aaPredicted RBP18.96■□□□□ 0.63
SMARCA4-215ENST00000590574 GNA14O95837 355 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 USH1GQ495M9 461 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 TRIM31Q9BZY9 425 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 ZBTB21Q9ULJ3 1066 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 MTF1Q14872 753 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 ARL6IP4Q66PJ3 421 aaKnown RBP18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 DPP8Q6V1X1 898 aaPredicted RBP18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 USP17L3A6NCW0 530 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 USP17L4A6NCW7 530 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 TRIM49BA6NDI0 452 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 CYP2D6P10635 497 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 PLCG1P19174 1290 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 TNFAIP3P21580 790 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 RASSF7Q02833 373 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 USP17L1Q7RTZ2 530 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 DDX25Q9UHL0 483 aaKnown RBP18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 PCDHA12Q9UN75 941 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 SLIT1O75093 1534 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 RCAN1P53805 252 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 RETREG2Q8NC44 543 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 MRFAP1Q9Y605 127 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 KDM3AQ9Y4C1 1321 aa18.95■□□□□ 0.62
SMARCA4-215ENST00000590574 GCNT3O95395 438 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms