RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 TKFCQ3LXA3 575 aa21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 IFIT1BQ5T764 474 aaKnown RBP21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 BTNL9Q6UXG8 535 aa21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 NCOA7Q8NI08 942 aa21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 HTATIP2Q9BUP3 242 aa21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 RNF146Q9NTX7 359 aa21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 CCPG1Q9ULG6 757 aa21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 DIS3Q9Y2L1 958 aaKnown RBP21.52■■□□□ 1.04
LDLRAD4-215ENST00000590371 MKI67P46013 3256 aaKnown RBP21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 ERICH2A1L162 156 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 E7EWF7 191 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 CYBAP13498 195 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 ZNF792Q3KQV3 632 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 GPATCH4Q5T3I0 446 aaKnown RBP21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 CYB5R4Q7L1T6 521 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 ANKLE1Q8NAG6 615 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 ANKS1AQ92625 1134 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 ZNF536O15090 1300 aa21.51■■□□□ 1.03
LDLRAD4-215ENST00000590371 MSCO60682 206 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 CDC45O75419 566 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 GOLGA8HP0CJ92 632 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 SNHG28P0DPA3 235 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 SART3Q15020 963 aaKnown RBP21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 NECAB2Q7Z6G3 386 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 DPF3Q92784 378 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 PAWRQ96IZ0 340 aaKnown RBP21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 TINF2Q9BSI4 451 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 LSG1Q9H089 658 aaKnown RBP21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 RANBP17Q9H2T7 1088 aaKnown RBP21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 DDX20Q9UHI6 824 aaKnown RBP21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 OGDHLQ9ULD0 1010 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 FRMPD3Q5JV73 1810 aa21.5■■□□□ 1.03
LDLRAD4-215ENST00000590371 IFIT3O14879 490 aaKnown RBP21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 ICAM1P05362 532 aa21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 PRAMEF19Q5SWL8 479 aa21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 PRPF38BQ5VTL8 546 aaKnown RBP21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 UBE2Q1Q7Z7E8 422 aa21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 TRPV1Q8NER1 839 aa21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 DIS3LQ8TF46 1054 aaKnown RBP21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 TAF6LQ9Y6J9 622 aa21.49■■□□□ 1.03
LDLRAD4-215ENST00000590371 IGHA2P01877 340 aa21.48■■□□□ 1.03
LDLRAD4-215ENST00000590371 PARP1P09874 1014 aaKnown RBP21.48■■□□□ 1.03
LDLRAD4-215ENST00000590371 ASPRV1Q53RT3 343 aa21.48■■□□□ 1.03
LDLRAD4-215ENST00000590371 LHX8Q68G74 356 aa21.48■■□□□ 1.03
LDLRAD4-215ENST00000590371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.48■■□□□ 1.03
LDLRAD4-215ENST00000590371 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
LDLRAD4-215ENST00000590371 POTEB2H3BUK9 544 aa21.47■■□□□ 1.03
LDLRAD4-215ENST00000590371 DHX16O60231 1041 aaKnown RBP21.47■■□□□ 1.03
LDLRAD4-215ENST00000590371 STOX1Q6ZVD7 989 aa21.47■■□□□ 1.03
LDLRAD4-215ENST00000590371 UBA5Q9GZZ9 404 aa21.47■■□□□ 1.03
LDLRAD4-215ENST00000590371 PNMA2Q9UL42 364 aa21.47■■□□□ 1.03
LDLRAD4-215ENST00000590371 PFASO15067 1338 aa21.47■■□□□ 1.03
LDLRAD4-215ENST00000590371 DNAJC25-GNG10A0A024R161 153 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 SEPT4O43236 478 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 TAL1P17542 331 aaPredicted RBP21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 WTAPQ15007 396 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 SEC23AQ15436 765 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 MUM1L1Q5H9M0 696 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 ANO1Q5XXA6 986 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 NSMFQ6X4W1 530 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 CHST3Q7LGC8 479 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 MSL3Q8N5Y2 521 aaKnown RBP21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 C11orf49Q9H6J7 331 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 NRBP1Q9UHY1 535 aa21.46■■□□□ 1.03
LDLRAD4-215ENST00000590371 SLC27A2O14975 620 aa21.45■■□□□ 1.02
LDLRAD4-215ENST00000590371 CREB3L3Q68CJ9 461 aa21.45■■□□□ 1.02
LDLRAD4-215ENST00000590371 CPVLQ9H3G5 476 aa21.45■■□□□ 1.02
LDLRAD4-215ENST00000590371 SYNGAP1Q96PV0 1343 aa21.45■■□□□ 1.02
LDLRAD4-215ENST00000590371 MYCNP04198 464 aaPredicted RBP21.44■■□□□ 1.02
LDLRAD4-215ENST00000590371 CNTN2Q02246 1040 aa21.44■■□□□ 1.02
LDLRAD4-215ENST00000590371 TMEM67Q5HYA8 995 aa21.44■■□□□ 1.02
LDLRAD4-215ENST00000590371 RNF20Q5VTR2 975 aa21.44■■□□□ 1.02
LDLRAD4-215ENST00000590371 ZNF467Q7Z7K2 595 aaPredicted RBP21.44■■□□□ 1.02
LDLRAD4-215ENST00000590371 ZHX1Q9UKY1 873 aaPredicted RBP21.44■■□□□ 1.02
LDLRAD4-215ENST00000590371 SMCHD1A6NHR9 2005 aa21.44■■□□□ 1.02
LDLRAD4-215ENST00000590371 CDC37Q16543 378 aaPredicted RBP21.43■■□□□ 1.02
LDLRAD4-215ENST00000590371 USH1GQ495M9 461 aa21.43■■□□□ 1.02
LDLRAD4-215ENST00000590371 MB21D2Q8IYB1 491 aaPredicted RBP21.43■■□□□ 1.02
LDLRAD4-215ENST00000590371 VAT1LQ9HCJ6 419 aa21.43■■□□□ 1.02
LDLRAD4-215ENST00000590371 MYH6P13533 1939 aa21.43■■□□□ 1.02
LDLRAD4-215ENST00000590371 MCM3APO60318 1980 aa21.43■■□□□ 1.02
LDLRAD4-215ENST00000590371 PTPDC1A2A3K4 754 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 EVI5O60447 810 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 RARBP10826 455 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 MNX1P50219 401 aaPredicted RBP21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 NECTIN1Q15223 517 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 MAMDC4Q6UXC1 1216 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 ADGRF4Q8IZF3 695 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 FAM133AQ8N9E0 248 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 ARRDC4Q8NCT1 418 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 WDR19Q8NEZ3 1342 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 CYP39A1Q9NYL5 469 aa21.42■■□□□ 1.02
LDLRAD4-215ENST00000590371 PRC1O43663 620 aa21.41■■□□□ 1.02
LDLRAD4-215ENST00000590371 AKR1A1P14550 325 aa21.41■■□□□ 1.02
LDLRAD4-215ENST00000590371 MCM5P33992 734 aa21.41■■□□□ 1.02
LDLRAD4-215ENST00000590371 ANTXR2P58335 489 aa21.41■■□□□ 1.02
LDLRAD4-215ENST00000590371 ARMCX2Q7L311 632 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms