RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
DDX39A-212ENST00000590260 SYDE2Q5VT97 1194 aa21.41■■□□□ 1.02
DDX39A-212ENST00000590260 MB21D2Q8IYB1 491 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-212ENST00000590260 SLC27A2O14975 620 aa21.4■■□□□ 1.02
DDX39A-212ENST00000590260 FDX1P10109 184 aa21.4■■□□□ 1.02
DDX39A-212ENST00000590260 IKQ13123 557 aaPredicted RBP21.4■■□□□ 1.02
DDX39A-212ENST00000590260 KCTD2Q14681 263 aa21.4■■□□□ 1.02
DDX39A-212ENST00000590260 CCDC174Q6PII3 467 aa21.4■■□□□ 1.02
DDX39A-212ENST00000590260 CHST3Q7LGC8 479 aa21.4■■□□□ 1.02
DDX39A-212ENST00000590260 PPP4R2Q9NY27 417 aa21.4■■□□□ 1.02
DDX39A-212ENST00000590260 CDC45O75419 566 aa21.39■■□□□ 1.01
DDX39A-212ENST00000590260 CCDC178Q5BJE1 867 aa21.39■■□□□ 1.01
DDX39A-212ENST00000590260 MUM1L1Q5H9M0 696 aa21.39■■□□□ 1.01
DDX39A-212ENST00000590260 PRAMEF19Q5SWL8 479 aa21.39■■□□□ 1.01
DDX39A-212ENST00000590260 DIS3LQ8TF46 1054 aaKnown RBP21.39■■□□□ 1.01
DDX39A-212ENST00000590260 KAT14Q9H8E8 782 aa21.39■■□□□ 1.01
DDX39A-212ENST00000590260 HOMER2Q9NSB8 354 aa21.39■■□□□ 1.01
DDX39A-212ENST00000590260 OGDHLQ9ULD0 1010 aa21.39■■□□□ 1.01
DDX39A-212ENST00000590260 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
DDX39A-212ENST00000590260 SLC35G1Q2M3R5 365 aa21.38■■□□□ 1.01
DDX39A-212ENST00000590260 MFSD14CQ5VZR4 134 aa21.38■■□□□ 1.01
DDX39A-212ENST00000590260 CREB3L3Q68CJ9 461 aa21.38■■□□□ 1.01
DDX39A-212ENST00000590260 CHST13Q8NET6 341 aa21.38■■□□□ 1.01
DDX39A-212ENST00000590260 UBA5Q9GZZ9 404 aa21.38■■□□□ 1.01
DDX39A-212ENST00000590260 ANO2Q9NQ90 1003 aa21.38■■□□□ 1.01
DDX39A-212ENST00000590260 GPHNQ9NQX3 736 aaPredicted RBP21.38■■□□□ 1.01
DDX39A-212ENST00000590260 RNF146Q9NTX7 359 aa21.38■■□□□ 1.01
DDX39A-212ENST00000590260 ALPK3Q96L96 1907 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 ASTN1O14525 1302 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 TFRCP02786 760 aaKnown RBP21.37■■□□□ 1.01
DDX39A-212ENST00000590260 ICAM1P05362 532 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 KIAA1211Q6ZU35 1233 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 STAG2Q8N3U4 1231 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 NCOA7Q8NI08 942 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 IGDCC4Q8TDY8 1250 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 UBAC1Q9BSL1 405 aa21.37■■□□□ 1.01
DDX39A-212ENST00000590260 DIS3Q9Y2L1 958 aaKnown RBP21.37■■□□□ 1.01
DDX39A-212ENST00000590260 CTDP1Q9Y5B0 961 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-212ENST00000590260 FARP2O94887 1054 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-212ENST00000590260 ALAS1P13196 640 aa21.36■■□□□ 1.01
DDX39A-212ENST00000590260 CNTN2Q02246 1040 aa21.36■■□□□ 1.01
DDX39A-212ENST00000590260 IFIT1BQ5T764 474 aaKnown RBP21.36■■□□□ 1.01
DDX39A-212ENST00000590260 TRERF1Q96PN7 1200 aa21.36■■□□□ 1.01
DDX39A-212ENST00000590260 TINF2Q9BSI4 451 aa21.36■■□□□ 1.01
DDX39A-212ENST00000590260 A1CFQ9NQ94 594 aaKnown RBP21.36■■□□□ 1.01
DDX39A-212ENST00000590260 LRRC37A2A6NM11 1700 aa21.35■■□□□ 1.01
DDX39A-212ENST00000590260 TRDNQ13061 729 aa21.35■■□□□ 1.01
DDX39A-212ENST00000590260 GPATCH4Q5T3I0 446 aaKnown RBP21.35■■□□□ 1.01
DDX39A-212ENST00000590260 FAM133AQ8N9E0 248 aa21.35■■□□□ 1.01
DDX39A-212ENST00000590260 PURBQ96QR8 312 aaKnown RBP21.35■■□□□ 1.01
DDX39A-212ENST00000590260 ACAD9Q9H845 621 aa21.35■■□□□ 1.01
DDX39A-212ENST00000590260 SLC5A4Q9NY91 659 aa21.35■■□□□ 1.01
DDX39A-212ENST00000590260 CCPG1Q9ULG6 757 aa21.35■■□□□ 1.01
DDX39A-212ENST00000590260 IFIT3O14879 490 aaKnown RBP21.34■■□□□ 1.01
DDX39A-212ENST00000590260 SNAI1O95863 264 aaPredicted RBP21.34■■□□□ 1.01
DDX39A-212ENST00000590260 TKFCQ3LXA3 575 aa21.34■■□□□ 1.01
DDX39A-212ENST00000590260 MAMDC4Q6UXC1 1216 aa21.34■■□□□ 1.01
DDX39A-212ENST00000590260 RALYLQ86SE5 291 aaKnown RBP21.34■■□□□ 1.01
DDX39A-212ENST00000590260 RASEFQ8IZ41 740 aa21.34■■□□□ 1.01
DDX39A-212ENST00000590260 ANKRD35Q8N283 1001 aa21.34■■□□□ 1.01
DDX39A-212ENST00000590260 CLEC4DQ8WXI8 215 aa21.34■■□□□ 1.01
DDX39A-212ENST00000590260 PAWRQ96IZ0 340 aaKnown RBP21.34■■□□□ 1.01
DDX39A-212ENST00000590260 FBXO40Q9UH90 709 aa21.34■■□□□ 1.01
DDX39A-212ENST00000590260 DDX20Q9UHI6 824 aaKnown RBP21.34■■□□□ 1.01
DDX39A-212ENST00000590260 MAD2L2Q9UI95 211 aa21.34■■□□□ 1.01
DDX39A-212ENST00000590260 DDX49Q9Y6V7 483 aaKnown RBP21.34■■□□□ 1.01
DDX39A-212ENST00000590260 SOWAHBA6NEL2 793 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 NFIBO00712 420 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 ZNF865P0CJ78 1059 aaPredicted RBP21.33■■□□□ 1.01
DDX39A-212ENST00000590260 TROAPQ12815 778 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 ASPRV1Q53RT3 343 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 ANO1Q5XXA6 986 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 ADGRF4Q8IZF3 695 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 DDX11Q96FC9 970 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 LY9Q9HBG7 655 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 MCM3APO60318 1980 aa21.33■■□□□ 1.01
DDX39A-212ENST00000590260 PALM3A6NDB9 673 aaPredicted RBP21.32■■□□□ 1
DDX39A-212ENST00000590260 ANKLE1Q8NAG6 615 aa21.32■■□□□ 1
DDX39A-212ENST00000590260 KATNBL1Q9H079 304 aa21.32■■□□□ 1
DDX39A-212ENST00000590260 JMJD4Q9H9V9 463 aa21.32■■□□□ 1
DDX39A-212ENST00000590260 CYP39A1Q9NYL5 469 aa21.32■■□□□ 1
DDX39A-212ENST00000590260 PFASO15067 1338 aa21.31■■□□□ 1
DDX39A-212ENST00000590260 WDR19Q8NEZ3 1342 aa21.31■■□□□ 1
DDX39A-212ENST00000590260 SEPT4O43236 478 aa21.31■■□□□ 1
DDX39A-212ENST00000590260 PARP1P09874 1014 aaKnown RBP21.31■■□□□ 1
DDX39A-212ENST00000590260 CNGA1P29973 690 aa21.31■■□□□ 1
DDX39A-212ENST00000590260 GRM4Q14833 912 aa21.31■■□□□ 1
DDX39A-212ENST00000590260 ADCK5Q3MIX3 580 aa21.31■■□□□ 1
DDX39A-212ENST00000590260 ZNF467Q7Z7K2 595 aaPredicted RBP21.31■■□□□ 1
DDX39A-212ENST00000590260 SYNGAP1Q96PV0 1343 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 SH2B2O14492 632 aaPredicted RBP21.3■■□□□ 1
DDX39A-212ENST00000590260 ADCY6O43306 1168 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 PRC1O43663 620 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 COL6A1P12109 1028 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 CAPN2P17655 700 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 WTAPQ15007 396 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 CDC37Q16543 378 aaPredicted RBP21.3■■□□□ 1
DDX39A-212ENST00000590260 TMEM67Q5HYA8 995 aa21.3■■□□□ 1
DDX39A-212ENST00000590260 LENG1Q96BZ8 264 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms