RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 DUSP11O75319 330 aaKnown RBP12.39□□□□□ -0.43
RETREG3-209ENST00000590035 FDX1P10109 184 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 BMP3P12645 472 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 MX1P20591 662 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 EPHB4P54760 987 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 LRRFIP1Q32MZ4 808 aaKnown RBP12.39□□□□□ -0.43
RETREG3-209ENST00000590035 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-209ENST00000590035 FAM133AQ8N9E0 248 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 RAVER2Q9HCJ3 691 aaKnown RBP12.39□□□□□ -0.43
RETREG3-209ENST00000590035 PRKAG2Q9UGJ0 569 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 FBXO40Q9UH90 709 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
RETREG3-209ENST00000590035 ASTN1O14525 1302 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 RAD21O60216 631 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 ZBED4O75132 1171 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 CLTBP09497 229 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 CDK7P50613 346 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 ACLYP53396 1101 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 TFAP4Q01664 338 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 PDE4BQ07343 736 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 ALX1Q15699 326 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 SLFN13Q68D06 897 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-209ENST00000590035 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 FAM184BQ9ULE4 1060 aa12.38□□□□□ -0.43
RETREG3-209ENST00000590035 ORC4O43929 436 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 TSPY3P0CV98 308 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 TSPY8P0CW00 308 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
RETREG3-209ENST00000590035 GJA9P57773 515 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-209ENST00000590035 SMAD3P84022 425 aaKnown RBP12.37□□□□□ -0.43
RETREG3-209ENST00000590035 ACVR2BQ13705 512 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 VPS53Q5VIR6 699 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 ARMCX2Q7L311 632 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 TICAM2Q86XR7 235 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 CPXCR1Q8N123 301 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 STAG1Q8WVM7 1258 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 FSD1Q9BTV5 496 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 NAPBQ9H115 298 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 ABHD16BQ9H3Z7 469 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 A1CFQ9NQ94 594 aaKnown RBP12.37□□□□□ -0.43
RETREG3-209ENST00000590035 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 CHD7Q9P2D1 2997 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 ELP1O95163 1332 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
RETREG3-209ENST00000590035 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 TMEM232C9JQI7 657 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 APPP05067 770 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 STAT2P52630 851 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 CNTN2Q02246 1040 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-209ENST00000590035 KCNA10Q16322 511 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 CCDC144BQ3MJ40 725 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 RASGRP2Q7LDG7 609 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 SLC43A3Q8NBI5 491 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 MORC4Q8TE76 937 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 AGBL1Q96MI9 1066 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 TTYH1Q9H313 450 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-209ENST00000590035 PRDM5Q9NQX1 630 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-209ENST00000590035 GNEQ9Y223 722 aaKnown RBP12.36□□□□□ -0.43
RETREG3-209ENST00000590035 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
RETREG3-209ENST00000590035 DLL1O00548 723 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 NMT2O60551 498 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 PDE1AP54750 535 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 BTNL9Q6UXG8 535 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 CCDC144CPQ8IYA2 1237 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 ANKRD35Q8N283 1001 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 CHURC1Q8WUH1 139 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 SEMA6BQ9H3T3 888 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 STARD7Q9NQZ5 370 aa12.35□□□□□ -0.43
RETREG3-209ENST00000590035 ZHX1Q9UKY1 873 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-209ENST00000590035 TMEM265A0A087WTH1 108 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
RETREG3-209ENST00000590035 ASGR1P07306 291 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 SLC3A2P08195 630 aaKnown RBP12.34□□□□□ -0.43
RETREG3-209ENST00000590035 MCCP23508 829 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 SLC1A4P43007 532 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 C16orf59Q7L2K0 433 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 RANBP17Q9H2T7 1088 aaKnown RBP12.34□□□□□ -0.43
RETREG3-209ENST00000590035 HELLSQ9NRZ9 838 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 TCP11L1Q9NUJ3 509 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 PRR12Q9ULL5 1215 aa12.34□□□□□ -0.43
RETREG3-209ENST00000590035 TRANK1O15050 2925 aa12.33□□□□□ -0.44
RETREG3-209ENST00000590035 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms