RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 AMNQ9BXJ7 453 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 ELP3Q9H9T3 547 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 FBXO28Q9NVF7 368 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 PCDHA1Q9Y5I3 950 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 ADAMTS3O15072 1205 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 NASPP49321 788 aaPredicted RBP20■□□□□ 0.79
CXXC1-212ENST00000589940 SNAP25P60880 206 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 SKOR2Q2VWA4 1001 aaPredicted RBP20■□□□□ 0.79
CXXC1-212ENST00000589940 BICD2Q8TD16 824 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 CLMNQ96JQ2 1002 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 TANGO6Q9C0B7 1094 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 RANBP17Q9H2T7 1088 aaKnown RBP20■□□□□ 0.79
CXXC1-212ENST00000589940 RPAP3Q9H6T3 665 aaPredicted RBP20■□□□□ 0.79
CXXC1-212ENST00000589940 RCOR1Q9UKL0 485 aa20■□□□□ 0.79
CXXC1-212ENST00000589940 TRAK2O60296 914 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 PPATQ06203 517 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 EARS2Q5JPH6 523 aaKnown RBP19.99■□□□□ 0.79
CXXC1-212ENST00000589940 ANO1Q5XXA6 986 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 FBXO11Q86XK2 927 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 ERO1BQ86YB8 467 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 PRPF38AQ8NAV1 312 aaKnown RBP19.99■□□□□ 0.79
CXXC1-212ENST00000589940 SLF1Q9BQI6 1058 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 CLIC4Q9Y696 253 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 YEATS4O95619 227 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 TOB1P50616 345 aaPredicted RBP19.99■□□□□ 0.79
CXXC1-212ENST00000589940 ADCY7P51828 1080 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 SH3D19Q5HYK7 790 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 LDLRAD1Q5T700 205 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 ZNF408Q9H9D4 720 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 TMOD4Q9NZQ9 345 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.99■□□□□ 0.79
CXXC1-212ENST00000589940 PCDHA6Q9UN73 950 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 PCDHA8Q9Y5H6 950 aa19.99■□□□□ 0.79
CXXC1-212ENST00000589940 FAM205CA6NFA0 338 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 SPDYE5A6NIY4 337 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 GADD45BO75293 160 aaPredicted RBP19.98■□□□□ 0.79
CXXC1-212ENST00000589940 TRAF1Q13077 416 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 LINC00301Q8NCQ3 95 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 CNKSR2Q8WXI2 1034 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 RIC8AQ9NPQ8 531 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 UNCXA6NJT0 531 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 UBE2HP62256 183 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 FMR1Q06787 632 aaKnown RBP eCLIP19.98■□□□□ 0.79
CXXC1-212ENST00000589940 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
CXXC1-212ENST00000589940 PIK3AP1Q6ZUJ8 805 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 REXO1Q8N1G1 1221 aaKnown RBP19.98■□□□□ 0.79
CXXC1-212ENST00000589940 RASGRP4Q8TDF6 673 aa19.98■□□□□ 0.79
CXXC1-212ENST00000589940 NOL7Q9UMY1 257 aaKnown RBP19.98■□□□□ 0.79
CXXC1-212ENST00000589940 DDX49Q9Y6V7 483 aaKnown RBP19.98■□□□□ 0.79
CXXC1-212ENST00000589940 FLOT1O75955 427 aa19.97■□□□□ 0.79
CXXC1-212ENST00000589940 SF3A1Q15459 793 aaKnown RBP19.97■□□□□ 0.79
CXXC1-212ENST00000589940 CUL5Q93034 780 aa19.97■□□□□ 0.79
CXXC1-212ENST00000589940 OTUD5Q96G74 571 aa19.97■□□□□ 0.79
CXXC1-212ENST00000589940 GLT8D2Q9H1C3 349 aa19.97■□□□□ 0.79
CXXC1-212ENST00000589940 CCDC194A0A1B0GVG4 234 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 TRAPPC10P48553 1259 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 FKBP1BP68106 108 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 STK38Q15208 465 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 SAMD1Q6SPF0 538 aaPredicted RBP19.96■□□□□ 0.79
CXXC1-212ENST00000589940 KCNG4Q8TDN1 519 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 PPP1R9AQ9ULJ8 1098 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 IRF6O14896 467 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 MBD3O95983 291 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 MRPL12P52815 198 aaKnown RBP19.96■□□□□ 0.79
CXXC1-212ENST00000589940 KLHL40Q2TBA0 621 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 USH1GQ495M9 461 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 PSTPIP2Q9H939 334 aa19.96■□□□□ 0.79
CXXC1-212ENST00000589940 PPIL2Q13356 520 aa19.95■□□□□ 0.78
CXXC1-212ENST00000589940 SLC39A14Q15043 492 aa19.95■□□□□ 0.78
CXXC1-212ENST00000589940 CCDC174Q6PII3 467 aa19.95■□□□□ 0.78
CXXC1-212ENST00000589940 KRT25Q7Z3Z0 450 aa19.95■□□□□ 0.78
CXXC1-212ENST00000589940 GPT2Q8TD30 523 aa19.95■□□□□ 0.78
CXXC1-212ENST00000589940 CXCL11O14625 94 aa19.95■□□□□ 0.78
CXXC1-212ENST00000589940 PCDHB6Q9Y5E3 794 aa19.95■□□□□ 0.78
CXXC1-212ENST00000589940 SPTLC2O15270 562 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 PTPAQ15257 358 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 CHADLQ6NUI6 762 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 OPTNQ96CV9 577 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 SLC38A10Q9HBR0 1119 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 GBA2Q9HCG7 927 aaPredicted RBP19.94■□□□□ 0.78
CXXC1-212ENST00000589940 BIN2Q9UBW5 565 aaPredicted RBP19.94■□□□□ 0.78
CXXC1-212ENST00000589940 KCNH4Q9UQ05 1017 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 A0A0G2JLL6 359 aaPredicted RBP19.94■□□□□ 0.78
CXXC1-212ENST00000589940 GOLGA6L4A6NEF3 574 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 CELF2O95319 508 aaKnown RBP19.94■□□□□ 0.78
CXXC1-212ENST00000589940 FDX1P10109 184 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 ATP2B1P20020 1258 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 PRRT2Q7Z6L0 340 aaPredicted RBP19.94■□□□□ 0.78
CXXC1-212ENST00000589940 PGBD1Q96JS3 809 aa19.94■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L15C9J2P7 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L13C9JLJ4 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L11C9JVI0 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L18D6R9N7 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L22D6RA61 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L17D6RBQ6 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L19D6RCP7 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L20D6RJB6 530 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 ME1P48163 572 aa19.93■□□□□ 0.78
CXXC1-212ENST00000589940 CLK2P49760 499 aaKnown RBP19.93■□□□□ 0.78
CXXC1-212ENST00000589940 USP17L24Q0WX57 530 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms