RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 TRIM27P14373 513 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 NKX3-2P78367 333 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 TTLL4Q14679 1199 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 CCDC144BQ3MJ40 725 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 FAM83BQ5T0W9 1011 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 LCORLQ8N3X6 602 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 SSH3Q8TE77 659 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 SCLYQ96I15 445 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 TRPV6Q9H1D0 765 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 MTIF3Q9H2K0 278 aaKnown RBP9.64□□□□□ -0.87
VAT1-207ENST00000589828 SLC4A7Q9Y6M7 1214 aa9.64□□□□□ -0.87
VAT1-207ENST00000589828 TCF20Q9UGU0 1960 aaKnown RBP9.64□□□□□ -0.87
VAT1-207ENST00000589828 TCRBV5S4A2TA0A5A2 114 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 PI4K2BG5E9Z4 385 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 CA3P07451 260 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 CT47B1P0C2W7 299 aaPredicted RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 PDE6AP16499 860 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 ATP2A2P16615 1042 aaKnown RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 ATP8B2P98198 1209 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 OS9Q13438 667 aaPredicted RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 SNRNP48Q6IEG0 339 aaKnown RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 CXCL17Q6UXB2 119 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 AGBL1Q96MI9 1066 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 NUP88Q99567 741 aaPredicted RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 CRNKL1Q9BZJ0 848 aaKnown RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 CHD7Q9P2D1 2997 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 SWAP70Q9UH65 585 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 COG5Q9UP83 839 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 NOP58Q9Y2X3 529 aaKnown RBP9.63□□□□□ -0.87
VAT1-207ENST00000589828 BDP1A6H8Y1 2624 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 MYO9BQ13459 2157 aa9.63□□□□□ -0.87
VAT1-207ENST00000589828 ZBBXA8MT70 800 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 B4GALT4O60513 344 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 COPB2P35606 906 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 CDK8P49336 464 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 ITGA7Q13683 1181 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 TMEM63BQ5T3F8 832 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 ARMCX2Q7L311 632 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
VAT1-207ENST00000589828 CLUAP1Q96AJ1 413 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.62□□□□□ -0.87
VAT1-207ENST00000589828 TEX13BQ9BXU2 312 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 ABHD16BQ9H3Z7 469 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 ARMT1Q9H993 441 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 SPC25Q9HBM1 224 aa9.62□□□□□ -0.87
VAT1-207ENST00000589828 DDX49Q9Y6V7 483 aaKnown RBP9.62□□□□□ -0.87
VAT1-207ENST00000589828 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 RBAK-RBAKDNI3L0D1 243 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 GTPBP6O43824 516 aaPredicted RBP9.61□□□□□ -0.87
VAT1-207ENST00000589828 LPXNO60711 386 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 MRE11P49959 708 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 PSMC6P62333 389 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 CNTN2Q02246 1040 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 TAP1Q03518 808 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 GRB10Q13322 594 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 TMEM67Q5HYA8 995 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 SLC9C2Q5TAH2 1124 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
VAT1-207ENST00000589828 CCDC144CPQ8IYA2 1237 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 CPXCR1Q8N123 301 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 ARNTL2Q8WYA1 636 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 HLA-CQ95604 372 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 CCDC17Q96LX7 622 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
VAT1-207ENST00000589828 GNEQ9Y223 722 aaKnown RBP9.61□□□□□ -0.87
VAT1-207ENST00000589828 MYO5AQ9Y4I1 1855 aaKnown RBP9.61□□□□□ -0.87
VAT1-207ENST00000589828 MYH1P12882 1939 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 XIRP2A4UGR9 3374 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 ATP2A1O14983 1001 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 RAD21O60216 631 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 CHGBP05060 677 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 CHRM1P11229 460 aaPredicted RBP9.6□□□□□ -0.87
VAT1-207ENST00000589828 CYP2C9P11712 490 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 TNFAIP2Q03169 654 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 C12orf60Q5U649 245 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 TMED8Q6PL24 325 aaPredicted RBP9.6□□□□□ -0.87
VAT1-207ENST00000589828 C16orf86Q6ZW13 317 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 DEFB128Q7Z7B8 93 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 RPUSD2Q8IZ73 545 aaKnown RBP9.6□□□□□ -0.87
VAT1-207ENST00000589828 TMEM57Q8N5G2 664 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 SLF1Q9BQI6 1058 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 KANSL2Q9H9L4 492 aa9.6□□□□□ -0.87
VAT1-207ENST00000589828 RAVER2Q9HCJ3 691 aaKnown RBP9.6□□□□□ -0.87
VAT1-207ENST00000589828 PRRC2BQ5JSZ5 2229 aaKnown RBP9.6□□□□□ -0.87
VAT1-207ENST00000589828 PIEZO1Q92508 2521 aa9.59□□□□□ -0.87
VAT1-207ENST00000589828 SOWAHBA6NEL2 793 aa9.59□□□□□ -0.87
VAT1-207ENST00000589828 USP17L12C9JPN9 530 aa9.59□□□□□ -0.87
VAT1-207ENST00000589828 USP17L21D6R901 530 aa9.59□□□□□ -0.87
VAT1-207ENST00000589828 DYNC1LI2O43237 492 aaPredicted RBP9.59□□□□□ -0.87
VAT1-207ENST00000589828 NDUFB10O96000 172 aa9.59□□□□□ -0.87
VAT1-207ENST00000589828 SMPD1P17405 629 aa9.59□□□□□ -0.87
VAT1-207ENST00000589828 FSCN1Q16658 493 aaKnown RBP9.59□□□□□ -0.87
VAT1-207ENST00000589828 TLK2Q86UE8 772 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms