RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 FERMT2Q96AC1 680 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 FGD4Q96M96 766 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 ABHD16BQ9H3Z7 469 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 ACAD9Q9H845 621 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 TCP11L1Q9NUJ3 509 aa14.45□□□□□ -0.1
VAT1-206ENST00000589709 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.45□□□□□ -0.1
VAT1-206ENST00000589709 TRIM6-TRIM34B2RNG4 842 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 NUCB1Q02818 461 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 TLE2Q04725 743 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 IKQ13123 557 aaPredicted RBP14.44□□□□□ -0.1
VAT1-206ENST00000589709 NMIQ13287 307 aaPredicted RBP14.44□□□□□ -0.1
VAT1-206ENST00000589709 ACVR2BQ13705 512 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 CHD1LQ86WJ1 897 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 FAM133AQ8N9E0 248 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 DCAF4Q8WV16 495 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 AGBL1Q96MI9 1066 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 ZHX1Q9UKY1 873 aaPredicted RBP14.44□□□□□ -0.1
VAT1-206ENST00000589709 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
VAT1-206ENST00000589709 LAMA3Q16787 3333 aa14.44□□□□□ -0.1
VAT1-206ENST00000589709 CCDC171Q6TFL3 1326 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 A0A1W2PQ45 241 aaPredicted RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 A0A1W2PQY0 241 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 MOXD2PA6NHM9 499 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 IGHDP01880 384 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 TOP1P11387 765 aaKnown RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 CST5P28325 142 aaPredicted RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 ACLYP53396 1101 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 MFAP1P55081 439 aaKnown RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 CCSAPQ6IQ19 270 aaPredicted RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 B4GALNT3Q6L9W6 998 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 BTNL9Q6UXG8 535 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 KCTD1Q719H9 257 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 ARMCX2Q7L311 632 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 ZNF589Q86UQ0 364 aaPredicted RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 PLEKHM2Q8IWE5 1019 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 YTHDC1Q96MU7 727 aaKnown RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 TTC14Q96N46 770 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 A1CFQ9NQ94 594 aaKnown RBP14.43□□□□□ -0.1
VAT1-206ENST00000589709 PDLIM7Q9NR12 457 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 HOMER2Q9NSB8 354 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
VAT1-206ENST00000589709 SYNRGQ9UMZ2 1314 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 SDSP20132 328 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 NT5C2P49902 561 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 NKX3-2P78367 333 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 CNTN2Q02246 1040 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 CCDC144BQ3MJ40 725 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 CCDC144CPQ8IYA2 1237 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 RILPL2Q969X0 211 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 LENG1Q96BZ8 264 aaPredicted RBP14.42□□□□□ -0.1
VAT1-206ENST00000589709 TOX2Q96NM4 488 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 TRERF1Q96PN7 1200 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 TOMM22Q9NS69 142 aa14.42□□□□□ -0.1
VAT1-206ENST00000589709 TRIM43BA6NCK2 446 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 SOWAHBA6NEL2 793 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 ASB14A6NK59 587 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 KIAA0355O15063 1070 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 ICAM1P05362 532 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 ALAS1P13196 640 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 GJA9P57773 515 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 KCNA10Q16322 511 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 RRP12Q5JTH9 1297 aaKnown RBP14.41□□□□□ -0.1
VAT1-206ENST00000589709 AKNAD1Q5T1N1 836 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 ANKRD33Q7Z3H0 272 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 SH3RF1Q7Z6J0 888 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 DEFB123Q8N688 67 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 PCSK9Q8NBP7 692 aaKnown RBP14.41□□□□□ -0.1
VAT1-206ENST00000589709 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 TRIM43Q96BQ3 446 aaPredicted RBP14.41□□□□□ -0.1
VAT1-206ENST00000589709 UPF3AQ9H1J1 476 aaKnown RBP14.41□□□□□ -0.1
VAT1-206ENST00000589709 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
VAT1-206ENST00000589709 RNF41Q9H4P4 317 aaPredicted RBP14.41□□□□□ -0.1
VAT1-206ENST00000589709 SPC25Q9HBM1 224 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 PRDM5Q9NQX1 630 aaPredicted RBP14.41□□□□□ -0.1
VAT1-206ENST00000589709 ELP1O95163 1332 aa14.41□□□□□ -0.1
VAT1-206ENST00000589709 CLTBP09497 229 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 CCDC96Q2M329 555 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 FAM109BQ6ICB4 259 aaPredicted RBP14.4□□□□□ -0.1
VAT1-206ENST00000589709 CCDC174Q6PII3 467 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 BADQ92934 168 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 CHMP4CQ96CF2 233 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 STARD7Q9NQZ5 370 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 CYP39A1Q9NYL5 469 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 PNMA2Q9UL42 364 aa14.4□□□□□ -0.1
VAT1-206ENST00000589709 HIP1O00291 1037 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 ADCY6O43306 1168 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 C6orf222P0C671 652 aaPredicted RBP14.39□□□□□ -0.11
VAT1-206ENST00000589709 SNAP25P60880 206 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 HAND2P61296 217 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 MUM1L1Q5H9M0 696 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 SYDE2Q5VT97 1194 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 TTBK2Q6IQ55 1244 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 RASGRP2Q7LDG7 609 aa14.39□□□□□ -0.11
VAT1-206ENST00000589709 GLT1D1Q96MS3 346 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms