RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 TBC1D1Q86TI0 1168 aaPredicted RBP16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 PARP9Q8IXQ6 854 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 HAUS7Q99871 368 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 SUFUQ9UMX1 484 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 EXOC7Q9UPT5 735 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 CTDSPL2Q05D32 466 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 DHX9Q08211 1270 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 GCKRQ14397 625 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 DENND2AQ9ULE3 1009 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 DNM3Q9UQ16 869 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 ADD1P35611 737 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 BIRC3Q13489 604 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 SCYL3Q8IZE3 742 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 ANKRD13CQ8N6S4 541 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 EAF2Q96CJ1 260 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 CNOT6LQ96LI5 555 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 FOXP1Q9H334 677 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 BTBD18B2RXH4 712 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 C6orf229H3BNL8 230 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 MFAP3LO75121 409 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 ATF2P15336 505 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 ZBED6P86452 979 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 UNC5CLQ8IV45 518 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 ZNF654Q8IZM8 581 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 CCDC89Q8N998 374 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 UHMK1Q8TAS1 419 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 RWDD2AQ9UIY3 292 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 TRPM2O94759 1503 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 SEMA3EO15041 775 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 STMN1P16949 149 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 KCNJ6P48051 423 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 KDM5CP41229 1560 aa16.01■□□□□ 0.15
SMARCA4-214ENST00000589677 B4DLN1 442 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 PLEKHF1Q96S99 279 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 CUEDC2Q9H467 287 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 ATP8A1Q9Y2Q0 1164 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 SERPINB6P35237 376 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 STRN3Q13033 797 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 PDCD7Q8N8D1 485 aaKnown RBP16■□□□□ 0.15
SMARCA4-214ENST00000589677 KLC4Q9NSK0 619 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 MRFAP1Q9Y605 127 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 ZBTB22O15209 634 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 ST13P4Q8IZP2 240 aaPredicted RBP16■□□□□ 0.15
SMARCA4-214ENST00000589677 NFATC2IPQ8NCF5 419 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 TBX22Q9Y458 520 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
SMARCA4-214ENST00000589677 PLXNC1O60486 1568 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 USP27XA6NNY8 438 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 EXOC5O00471 708 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 ABCB4P21439 1286 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 TEX11Q8IYF3 940 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 NDUFB9Q9Y6M9 179 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
SMARCA4-214ENST00000589677 A0A087WWV3 80 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 ANO9A1A5B4 782 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 ATP5HO75947 161 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 BIRC2Q13490 618 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 C6orf118Q5T5N4 469 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 HELBQ8NG08 1087 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 NEK9Q8TD19 979 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 NHEJ1Q9H9Q4 299 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 NEO1Q92859 1461 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 EXOC3O60645 756 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 TADA3O75528 432 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 RNF8O76064 485 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 SLFN14P0C7P3 912 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 HSPA6P17066 643 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 ADCY7P51828 1080 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 SMTNP53814 917 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 ZNF658Q5TYW1 1059 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 ABTB1Q969K4 478 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 BATF3Q9NR55 127 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 SAMSN1Q9NSI8 373 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 ARMCX3Q9UH62 379 aaPredicted RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 STK10O94804 968 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 ATP1A3P13637 1013 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 HOXC9P31274 260 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 TOGARAM2Q6ZUX3 1019 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 CCT6BQ92526 530 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 HAUS1Q96CS2 278 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 TBC1D7Q9P0N9 293 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 CAPRIN2Q6IMN6 1127 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 FANCBQ8NB91 859 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 YIPF3Q9GZM5 350 aa15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 METTL14Q9HCE5 456 aaKnown RBP15.99■□□□□ 0.15
SMARCA4-214ENST00000589677 SNX16P57768 344 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 C10orf76Q5T2E6 689 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 KIFC2Q96AC6 838 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 USTQ9Y2C2 406 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 GMNCA6NCL1 334 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms