RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 ARMCX2Q7L311 632 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 CHST13Q8NET6 341 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.2■□□□□ 0.5
ACTN4-211ENST00000589528 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
ACTN4-211ENST00000589528 PRDM12Q9H4Q4 367 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 ZNF287Q9HBT7 754 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 HOMER2Q9NSB8 354 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
ACTN4-211ENST00000589528 GRXCR1A8MXD5 290 aa18.19■□□□□ 0.5
ACTN4-211ENST00000589528 IGFBP4P22692 258 aa18.19■□□□□ 0.5
ACTN4-211ENST00000589528 PBX2P40425 430 aa18.19■□□□□ 0.5
ACTN4-211ENST00000589528 CDK7P50613 346 aa18.19■□□□□ 0.5
ACTN4-211ENST00000589528 IRX5P78411 483 aaPredicted RBP18.19■□□□□ 0.5
ACTN4-211ENST00000589528 SBK1Q52WX2 424 aa18.19■□□□□ 0.5
ACTN4-211ENST00000589528 ZNF444Q8N0Y2 327 aaPredicted RBP18.19■□□□□ 0.5
ACTN4-211ENST00000589528 UPF3AQ9H1J1 476 aaKnown RBP18.19■□□□□ 0.5
ACTN4-211ENST00000589528 THEGQ9P2T0 379 aa18.19■□□□□ 0.5
ACTN4-211ENST00000589528 COG6Q9Y2V7 657 aa18.19■□□□□ 0.5
ACTN4-211ENST00000589528 TDO2P48775 406 aa18.18■□□□□ 0.5
ACTN4-211ENST00000589528 IKQ13123 557 aaPredicted RBP18.18■□□□□ 0.5
ACTN4-211ENST00000589528 RAB30Q15771 203 aa18.18■□□□□ 0.5
ACTN4-211ENST00000589528 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
ACTN4-211ENST00000589528 FAM126BQ8IXS8 530 aa18.18■□□□□ 0.5
ACTN4-211ENST00000589528 CCDC144CPQ8IYA2 1237 aa18.18■□□□□ 0.5
ACTN4-211ENST00000589528 ATXN2LQ8WWM7 1075 aaKnown RBP18.18■□□□□ 0.5
ACTN4-211ENST00000589528 STRBPQ96SI9 672 aaKnown RBP18.18■□□□□ 0.5
ACTN4-211ENST00000589528 LRRCC1Q9C099 1032 aa18.18■□□□□ 0.5
ACTN4-211ENST00000589528 SLC38A10Q9HBR0 1119 aa18.18■□□□□ 0.5
ACTN4-211ENST00000589528 ADCY6O43306 1168 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 APPP05067 770 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 COL9A1P20849 921 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 CYP2C18P33260 490 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 OAZ1P54368 228 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 CCDC85BQ15834 202 aaPredicted RBP18.17■□□□□ 0.5
ACTN4-211ENST00000589528 AKNAD1Q5T1N1 836 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 GIMAP6Q6P9H5 292 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 C16orf59Q7L2K0 433 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 IL23AQ9NPF7 189 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 ZBTB40Q9NUA8 1239 aa18.17■□□□□ 0.5
ACTN4-211ENST00000589528 GSG1L2A8MUP6 293 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 PRDM1O75626 825 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 TTLL1O95922 423 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 BEX3Q00994 111 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 TNFAIP2Q03169 654 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.16■□□□□ 0.58e-8■□□□□ 11.2
ACTN4-211ENST00000589528 LRRC47Q8N1G4 583 aaKnown RBP18.16■□□□□ 0.5
ACTN4-211ENST00000589528 HIPK3Q9H422 1215 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 ACAD9Q9H845 621 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 SLC28A3Q9HAS3 691 aa18.16■□□□□ 0.5
ACTN4-211ENST00000589528 ASB14A6NK59 587 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 ZEB2O60315 1214 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 CABYRO75952 493 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 FGBP02675 491 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 GNAT2P19087 354 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 MRPS5P82675 430 aaKnown RBP18.15■□□□□ 0.5
ACTN4-211ENST00000589528 CNTN2Q02246 1040 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 RASIP1Q5U651 963 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 TLK2Q86UE8 772 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 HERVK_113Q902F9 699 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 CEP95Q96GE4 821 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 ASB2Q96Q27 587 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 AP5M1Q9H0R1 490 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 TSPYL2Q9H2G4 693 aaPredicted RBP18.15■□□□□ 0.5
ACTN4-211ENST00000589528 NKX2-4Q9H2Z4 354 aa18.15■□□□□ 0.5
ACTN4-211ENST00000589528 TSPY3P0CV98 308 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 TSPY8P0CW00 308 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 FDX1P10109 184 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 BMP3P12645 472 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 STAT2P52630 851 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 SLFN13Q68D06 897 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 CXCL17Q6UXB2 119 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 GMCL1P1Q8NEA9 526 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 APPBP2Q92624 585 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 FGD4Q96M96 766 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 MTMR4Q9NYA4 1195 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 SYNPO2Q9UMS6 1093 aa18.14■□□□□ 0.49
ACTN4-211ENST00000589528 NCOR1O75376 2440 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 IGKV6D-41A0A0C4DH26 115 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.13■□□□□ 0.49
ACTN4-211ENST00000589528 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 SMARCA5O60264 1052 aaPredicted RBP18.13■□□□□ 0.49
ACTN4-211ENST00000589528 CD4P01730 458 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 ITGA7Q13683 1181 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 OTOP2Q7RTS6 562 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 KBTBD3Q8NAB2 608 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 ADAMTS19Q8TE59 1207 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 OSBP2Q969R2 916 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 MKL1Q969V6 931 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 RNF146Q9NTX7 359 aa18.13■□□□□ 0.49
ACTN4-211ENST00000589528 TCF20Q9UGU0 1960 aaKnown RBP18.12■□□□□ 0.49
ACTN4-211ENST00000589528 ZBBXA8MT70 800 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 GPAA1O43292 621 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 ZFYP08048 801 aaPredicted RBP18.12■□□□□ 0.49
ACTN4-211ENST00000589528 SLC3A2P08195 630 aaKnown RBP18.12■□□□□ 0.49
ACTN4-211ENST00000589528 SLC1A4P43007 532 aa18.12■□□□□ 0.49
ACTN4-211ENST00000589528 CCL23P55773 120 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms