RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 ICAM1P05362 532 aa20.57■□□□□ 0.88
H3F3B-207ENST00000589417 ANTXR2P58335 489 aa20.57■□□□□ 0.88
H3F3B-207ENST00000589417 ASPRV1Q53RT3 343 aa20.57■□□□□ 0.88
H3F3B-207ENST00000589417 IGDCC4Q8TDY8 1250 aa20.57■□□□□ 0.88
H3F3B-207ENST00000589417 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
H3F3B-207ENST00000589417 GPCPD1Q9NPB8 672 aa20.57■□□□□ 0.88
H3F3B-207ENST00000589417 ISY1Q9ULR0 285 aaKnown RBP20.57■□□□□ 0.88
H3F3B-207ENST00000589417 MTMR7Q9Y216 660 aa20.57■□□□□ 0.88
H3F3B-207ENST00000589417 FRMPD2Q68DX3 1309 aaPredicted RBP20.56■□□□□ 0.88
H3F3B-207ENST00000589417 IFIT3O14879 490 aaKnown RBP20.56■□□□□ 0.88
H3F3B-207ENST00000589417 EPB41L2O43491 1005 aaKnown RBP20.56■□□□□ 0.88
H3F3B-207ENST00000589417 SLC16A2P36021 539 aa20.56■□□□□ 0.88
H3F3B-207ENST00000589417 SART3Q15020 963 aaKnown RBP20.56■□□□□ 0.88
H3F3B-207ENST00000589417 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
H3F3B-207ENST00000589417 UBE2Q1Q7Z7E8 422 aa20.56■□□□□ 0.88
H3F3B-207ENST00000589417 MSL3Q8N5Y2 521 aaKnown RBP20.56■□□□□ 0.88
H3F3B-207ENST00000589417 AGBL1Q96MI9 1066 aa20.56■□□□□ 0.88
H3F3B-207ENST00000589417 DEFB118Q96PH6 123 aa20.56■□□□□ 0.88
H3F3B-207ENST00000589417 NRBP1Q9UHY1 535 aa20.56■□□□□ 0.88
H3F3B-207ENST00000589417 ZNF467Q7Z7K2 595 aaPredicted RBP20.55■□□□□ 0.88
H3F3B-207ENST00000589417 KCNB2Q92953 911 aa20.55■□□□□ 0.88
H3F3B-207ENST00000589417 CHMP4CQ96CF2 233 aa20.55■□□□□ 0.88
H3F3B-207ENST00000589417 ACAD9Q9H845 621 aa20.55■□□□□ 0.88
H3F3B-207ENST00000589417 MKI67P46013 3256 aaKnown RBP20.55■□□□□ 0.88
H3F3B-207ENST00000589417 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
H3F3B-207ENST00000589417 WDR19Q8NEZ3 1342 aa20.54■□□□□ 0.88
H3F3B-207ENST00000589417 ERICH2A1L162 156 aa20.54■□□□□ 0.88
H3F3B-207ENST00000589417 MAMDC4Q6UXC1 1216 aa20.54■□□□□ 0.88
H3F3B-207ENST00000589417 TMEM87BQ96K49 555 aa20.54■□□□□ 0.88
H3F3B-207ENST00000589417 TRERF1Q96PN7 1200 aa20.54■□□□□ 0.88
H3F3B-207ENST00000589417 MAF1Q9H063 256 aa20.54■□□□□ 0.88
H3F3B-207ENST00000589417 OGDHLQ9ULD0 1010 aa20.54■□□□□ 0.88
H3F3B-207ENST00000589417 PALM3A6NDB9 673 aaPredicted RBP20.53■□□□□ 0.88
H3F3B-207ENST00000589417 PGK2P07205 417 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 PARP1P09874 1014 aaKnown RBP20.53■□□□□ 0.88
H3F3B-207ENST00000589417 CYBAP13498 195 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 CYP2C19P33261 490 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 MCM5P33992 734 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 TROAPQ12815 778 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 WTAPQ15007 396 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 LHX8Q68G74 356 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 TMTC2Q8N394 836 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 DDX11Q96FC9 970 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 MAP3K14Q99558 947 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 TINF2Q9BSI4 451 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 RNF146Q9NTX7 359 aa20.53■□□□□ 0.88
H3F3B-207ENST00000589417 MSCO60682 206 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 GOLGA8HP0CJ92 632 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 CCND3P30281 292 aaPredicted RBP20.52■□□□□ 0.88
H3F3B-207ENST00000589417 LIFRP42702 1097 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 SNAP25P60880 206 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 TMEM67Q5HYA8 995 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 CCDC174Q6PII3 467 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 ANKRD35Q8N283 1001 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 MAD2L2Q9UI95 211 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 CCPG1Q9ULG6 757 aa20.52■□□□□ 0.88
H3F3B-207ENST00000589417 REC8O95072 547 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 TFRCP02786 760 aaKnown RBP20.51■□□□□ 0.87
H3F3B-207ENST00000589417 ALAS1P13196 640 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 CHST3Q7LGC8 479 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 FAM133AQ8N9E0 248 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 TRPV1Q8NER1 839 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 MTMR8Q96EF0 704 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 FGD4Q96M96 766 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 UBA5Q9GZZ9 404 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 SENP2Q9HC62 589 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 A1CFQ9NQ94 594 aaKnown RBP20.51■□□□□ 0.87
H3F3B-207ENST00000589417 PFASO15067 1338 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 SYNGAP1Q96PV0 1343 aa20.51■□□□□ 0.87
H3F3B-207ENST00000589417 PRC1O43663 620 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 HSPA4P34932 840 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 SLC4A3P48751 1232 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 KRT32Q14532 448 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 GRM4Q14833 912 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 RASEFQ8IZ41 740 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 ADGRF4Q8IZF3 695 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 RGS22Q8NE09 1264 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 NEK1Q96PY6 1258 aa20.5■□□□□ 0.87
H3F3B-207ENST00000589417 KLRF2D3W0D1 207 aa20.49■□□□□ 0.87
H3F3B-207ENST00000589417 SH2B2O14492 632 aaPredicted RBP20.49■□□□□ 0.87
H3F3B-207ENST00000589417 EXOSC10Q01780 885 aaKnown RBP20.49■□□□□ 0.87
H3F3B-207ENST00000589417 COL9A3Q14050 684 aaPredicted RBP20.49■□□□□ 0.87
H3F3B-207ENST00000589417 MUM1L1Q5H9M0 696 aa20.49■□□□□ 0.87
H3F3B-207ENST00000589417 STAG2Q8N3U4 1231 aa20.49■□□□□ 0.87
H3F3B-207ENST00000589417 CLEC4DQ8WXI8 215 aa20.49■□□□□ 0.87
H3F3B-207ENST00000589417 JMJD4Q9H9V9 463 aa20.49■□□□□ 0.87
H3F3B-207ENST00000589417 HOMER2Q9NSB8 354 aa20.49■□□□□ 0.87
H3F3B-207ENST00000589417 CYP39A1Q9NYL5 469 aa20.49■□□□□ 0.87
H3F3B-207ENST00000589417 DDX20Q9UHI6 824 aaKnown RBP20.49■□□□□ 0.87
H3F3B-207ENST00000589417 TNRC18O15417 2968 aaPredicted RBP20.49■□□□□ 0.87
H3F3B-207ENST00000589417 SEPT4O43236 478 aa20.48■□□□□ 0.87
H3F3B-207ENST00000589417 DDAH1O94760 285 aa20.48■□□□□ 0.87
H3F3B-207ENST00000589417 MNX1P50219 401 aaPredicted RBP20.48■□□□□ 0.87
H3F3B-207ENST00000589417 CATIPQ7Z7H3 387 aa20.48■□□□□ 0.87
H3F3B-207ENST00000589417 SGMS1Q86VZ5 419 aa20.48■□□□□ 0.87
H3F3B-207ENST00000589417 CPVLQ9H3G5 476 aa20.48■□□□□ 0.87
H3F3B-207ENST00000589417 RIOX1Q9H6W3 641 aa20.48■□□□□ 0.87
H3F3B-207ENST00000589417 LOC102724159A0A0B4J2E5 919 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms